Conserved Protein Domain Family
BMC_PduT_repeat1

?
cd07053: BMC_PduT_repeat1 
1,2-propanediol utilization protein T (PduT), Bacterial Micro-Compartment (BMC) domain repeat 1
PduT proteins are homologs of the carboxysome shell protein. They are encoded within the pdu operon and might be required for the formation of the outer shell of the bacterial pdu polyhedral organelles which are involved in coenzyme B12-dependent degradation of 1,2-propanediol. Although it has been suggested that PduT might form hexamers and further assemble into the flat facets of the polyhedral outer shell of pdu organelles at present no experimental evidence directly supports this view. PduT proteins contain two tandem BMC domains repeats. This CD contains repeat 1 (the first BMC domain of PduT) as well as carboxysome shell protein sequence homolog, EutM protein, are also included in this CD. They too might exist as hexamers and might play similar functional roles in the construction of the eut organelle outer shell which still remains poorly understood.
Statistics
?
PSSM-Id: 132893
View PSSM: cd07053
Aligned: 28 rows
Threshold Bit Score: 79.1326
Threshold Setting Gi: 51245677
Created: 19-Nov-2008
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
putativeputative
Feature 1:putative hexamer interface [polypeptide binding site]
Evidence:
  • Comment:Based on Synechocystis sp. CcmK2 (2A1B) and CcmK4 (2A10)

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1             #  #        #  ##     #    #    #                                      
Q8XLY2         4 SIGALEFRSiskGIEVSNEVVKKAfVEVSYLKSiCPGKFFLIVNGDAGEVKEAIEFGEKLGekylvGSFIINSIHH 79  Clostridium perfrin...
ZP_01222592    4 AIGCIELNSiarGYLVADAMLKAAnVEILFNRTiCPGKFMVMVGGDVAAINAAVETGLRVGggevvDDLVIANVHP 79  Photobacterium prof...
YP_821994      5 SIGLIELTSiasGFLSCDAMLKAAdVDVVLSRSiCSGKYMVMVRGDVAAVQAAVSAGISGArfsviDSFVIPNLHE 80  Solibacter usitatus...
YP_001559736   5 SIGALEFISisrGMYVADAIVKKAdVEIIYFKTiCPGKFLVIVSGDEGEVDTAIDYGVNIAgktlfDSFKVHAVSP 80  Clostridium phytofe...
ZP_02326574    4 AIGVVELRSiskGYETADCMLKKSsVTIHHLKPiCPGKFLIIISGDTAEVQEAMDFARTEAngfriSDFVLHGVHP 79  Paenibacillus larva...
YP_001818939   6 SVGLIELSSvaaGYLVADTVLKAGnVKLYLSRSiCSGKYMVVIAGDAAGVESAIRAGAEAAegcliDSFVIAQIHP 81  Opitutus terrae PB90-1
Q5PDR6         4 AIGILELTSiakGMELGDAMLKSAnVDLLVSKTiCPGKFLLMLGGDIGAIQQAIETGTSQAgemlvDSLVLANIHP 79  Salmonella paratyphi
Q892D8         9 ALGLLEFNSiskGIETSDVLLKAAfVEVEILRQiCPGKFLTIISGDVEEVKEAIDKAKSKDnkklvESNIITSVHE 84  Clostridium tetani
Q720P3         5 SLGILELRSiskGYEMADVFLKAGnVTLFTFRPtCPGKFLIILQGASGELTSAMQDAKEEAgkfhvSSYILHMAHE 80  Listeria monocytoge...
ZP_01802924    4 SIGAIEFKSiakGIEVSNEMIKKSsVDVLYLKSiCPGKFLIIVGGETSYINECVDYGIKLGegyivDNFVINAISQ 79  Clostridium diffici...

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap