2FQP,3LAG


Conserved Protein Domain Family
cupin_BauB-like

?
cd06982: cupin_BauB-like 
Pseudomonas aeruginosa BauB and related proteins, cupin domain
This family includes bacterial proteins homologous to beta-alanine degradation protein BauB from Pseudomonas aeruginosa, which is involved in the degradation of beta-alanine. Also included are Rhodopseudomonas palustris Rpa4178 and Bordetella pertussis Bp2299, which are both proteins with unknown function. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.
Statistics
?
PSSM-Id: 380387
Aligned: 44 rows
Threshold Bit Score: 134.639
Created: 5-Dec-2008
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
metal bindingdimer interface
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1: metal binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:H H Y HClick to see conserved feature residue pattern help
Evidence:
  • Comment:The four-coordinate metallocenter includes three histidines and one glutamate.
  • Structure:2FQP: Bordetella pertussis Bp2299 binds zinc; contacts at 4.0A
  • Citation:PMID 8612079

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                    # #   #                                      #      
2FQP_A         6 GAIPTVQIDNeRVKVTEWRFPPgGETGWHRHsxDYVVVPXTtGPLLLEtpe-gsVTSQLTr-GVSYTRPeGVEHNVINps 83  Bordetella pert...
Q9I701         6 QAVPTVQVDNaEVIVTEWRFAPgAETGRHRHghDYVVVPLTdGTLLLEtpe-gdRHAPLVagQAYFRKA-GVEHNVINas 83  Pseudomonas aer...
WP_019643784   7 TAVPVLHVENeRVRVTEWQFAIgAETGFHVHeyDYTIVPLHpGVMRLTgpd-gdVREVTLipGVSYFRAaGTAHNVVNig 85  Novispirillum i...
WP_027853760   9 TAVATIDVDNdDVRVTRWNFAPgAETGHHRHeyDYVITPLTdSVMQIDdae-grRQVAITagVSYFRRA-GVEHNVTNas 86  Marinobacterium...
WP_028301213   6 LLAISEQINNeRTCVNHLLFPAgGESQWHRHdrDYVIVPMQdCQLEIDtge-gaKTVPMKagECYFRYA-GVEHNVINnt 83  Oceanospirillum...
WP_051692425   7 TAIADCSVDNeQVRVTRWSFAPgAETGHHRHeyDYVITPIThSQMRIEdaq-geRIVELLp-GVSYFRPaGIEHNVTNvg 84  Marinobacterium...
WP_076401378  10 TAQPVQHIDNdQVRVTEWRFPVgAETGFHRHemDYTIVPLNpGRMELTgpdgtiTHTELTpgVSYFRKA-GVEHNVKNig 88  Insolitispirill...
OUV65906       6 VARASQLMDNeQVRVTRFEFRPdDETGWHEHefDYVIVALTdCTMLIEege-geRTVDTErgAAYHRKA-GVKHNVINgg 83  Halieaceae bact...
WP_103039523   6 QAVSTQHVENeRTRVTEWRLVPgAETGAHVHgyDYVIVPVTtGAFTIVdpdgnaRQFPLEpgRSYFRKA-GVSHNVINdg 84  Azospirillum br...
PPR28239       3 DAVPTRLIDNdRVRVTEWKFGPgSHTGWHRHemDYVVVPVTnGKLHLKepd-geRTIELVlgQPYFREE-GVEHDVINps 80  Alphaproteobact...
Feature 1                     
2FQP_A        84 -dtEFVFVEIEIK 95  Bordetella pertussis Tohama I
Q9I701        84 -ahEVVFVETEIK 95  Pseudomonas aeruginosa PAO1
WP_019643784  86 -gtAFAFVEVELK 97  Novispirillum itersonii
WP_027853760  87 -dsPMAFVETEIK 98  Marinobacterium litorale
WP_028301213  84 -dqDIVLIEVEIK 95  Oceanospirillum beijerinckii
WP_051692425  85 -ddEMIFVELELK 96  Marinobacterium sp. AK27
WP_076401378  89 -daAFAFVEVELK 100 Insolitispirillum peregrinum
OUV65906      84 -ttSMAFVEVEMK 95  Halieaceae bacterium TMED122
WP_103039523  85 -asDIVFVEVEFL 96  Azospirillum brasilense
PPR28239      81 etdDVIFIEVETK 93  Alphaproteobacteria bacterium MarineAlpha10_Bin1

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap