Conserved Protein Domain Family
NTP_transferase_WcbM_like

?
cd06915: NTP_transferase_WcbM_like 
WcbM_like is a subfamily of nucleotidyl transferases.
WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Statistics
?
PSSM-Id: 133065
View PSSM: cd06915
Aligned: 32 rows
Threshold Bit Score: 238.992
Threshold Setting Gi: 31789413
Created: 7-Nov-2008
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
Feature 1:Substrate binding site
Evidence:
  • Comment:Putative substrate binding site based on conserved residues of similar proteins.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1           ###                                             #                            
AAK27852       3 AIILVGGLGKRLRSVVs-eLPKPMAPId-NKPFLHYIFWYLNkqgidQVILSTGYkHEMIETYFgnry--hgiSINYSIE 78  Aneurinibacillu...
YP_420161     12 VVVLAGGLGTRLRGVLgdqRPKILAPVq-GRPFLDLMVEWMAaagagRLVLSLGHlAQQVTVHLdrgr--wpiPIVTEIE 88  Magnetospirillu...
YP_864539     11 VFVLAGGQGTRIRSVLgenTPKLLAPLa-GQPFLHHLLGWLThfgfcEISFGLGHlAAPIVEALqnha-dpqlRLRAVTE 88  Magnetococcus s...
NP_442118     10 VVILAGGFGTRIKQQLp-dLPKPLAPVa-GQPFLDWQLRYLQqqgfrRSLLSTGYlAEKVAAYAqdad-ivdmAIACVAE 86  Synechocystis s...
ZP_02735762    7 VIVLCGGLGTRLRSAVp-dRPKALAPVggGQPFLEVQLELLRdrgarRFVLCVGHmADQIEAALgdgrglgvhIDYVRDG 85  Gemmata obscuri...
AAP58528       5 VAILAGGLATRMRPVTr-rLPKSLIDVg-GQPFAVRQVELLRehdvtDITFLVGHlGEMVAEALgdgsrwgvrLHYAFDG 82  uncultured Acid...
YP_001820852  12 VAILAGGLATRLRPLTe-rVPKLLLEVa-GEPFFSHQIRLLRaaglrRLILCLGHlGELIVERYgdgrnwdveIEYVFDG 89  Opitutus terrae...
YP_595626      4 VVILAGGLATRMHPHTk-tLPKALLSIh-GQPFIEHQLCLLAekgiqDIVLCLGHlGEQVIEYVekknkyglnIQWSMDG 81  Lawsonia intrac...
ZP_02736474    9 VLILAGGKATRLGDIAk-aVPKALVPLa-GRPFLDHQFADLHaqgirEVVMCVGHfAEQIRDYVgggerfglrVRYSEDG 86  Gemmata obscuri...
YP_001614385  10 AVILAGGLGTRMRPRTe-rTPKFLLPVa-GRPFGAWLLERLAaagfgEVVLCVGHlGDAVRRAMgdrf-aglpLHYADDG 86  Sorangium cellu...
Feature 1                                     # #                                                
AAK27852      79 QEPLGTGGAIKKAfrkt----teenVVIINGDTLFLVDLRKMferhi---sfkaDLTLALKPMKEFERYGTVITrds-rv 150 Aneurinibacillu...
YP_420161     89 PEPLGTGGALRYVlprl----hgdpVMIINGDTWLDADLGAAlaahr---ragcAASLVCVRVPDGQRYGRIEVdaggfv 161 Magnetospirillu...
YP_864539     89 PTPMGTAGAIRYGlqsgvl-dphrsLLVMNGDSMVQTDLTRFvaahq---akqaAATLLCVAMQDCSRFGRITCngdqqi 164 Magnetococcus s...
NP_442118     87 MEPLGTAGGFVNAvnhhgfreltpaWLVLNGDSLIVTDYRVLlaele---ddsvDGVILGVHVPDASRFGSLKVnsqgel 163 Synechocystis s...
ZP_02735762   86 EQLLGTAGALKRAerhf-----apaAFVTNGDTYTDVDLGQLlqahraaraagaVATLTLARVADAGRFGSIEFagg-rv 159 Gemmata obscuri...
AAP58528      83 PSPLGTGGAVRRAlpgl-----gdpFLLLYGDSYLECDYAAVagala---aggtEGLMTVYRNDGRLDRSNVLYdsg-ri 153 uncultured Acid...
YP_001820852  90 PKLLGTGGALIQAlpkl-----ghvFYVLYGDSYLPIDYQAVgrafl---assqLGLMTVFENRERYDSSNVWFen--gk 159 Opitutus terrae...
YP_595626     82 PHLLGTGGAIYNAlpll-----seqFMVLYGDSYLDIDYKVIadayq---kssqPALLTIYKNNNQFDTSNIQYeng-ci 152 Lawsonia intrac...
ZP_02736474   87 AKPLGTGGAVRRAlpli-----pdqCFVLYGDSLLDVSYAAVlgal----ppaaLAVMTVFRNENSYDTSNVVFqng-rl 156 Gemmata obscuri...
YP_001614385  87 PDLLGTAGALRRAlpql-----apmFLMTYGDSYLPFDYLAPlrdlr--thpgaLGTMAVYRNEGRFDASNAAVsgd-lv 158 Sorangium cellu...
Feature 1                                                                                        
AAK27852     151 IAFKEKGYhs-----eGNINGGVYIANKAIFECESlsekfSFEQDFLEKEFLQk-kFYGFIsd-aYFIDIGIPDDYRKAQ 223 Aneurinibacillu...
YP_420161    162 TRFLEKAPdp----tpALINAGVCLLSAPALARLGqstgpSFERDVLAELPRGw--LRAHVcesaRFIDIGTPESLDQAA 235 Magnetospirillu...
YP_864539    165 VRFSEKDTqdh---rpGLINGGFYLFEPAMLEQIQrmpgpSLEHDVFMGSLPFp--LYGYPcd-aPFIDFGTPASFAQAH 238 Magnetococcus s...
NP_442118    164 LQFAEKQAg------aGVINSGVYLLGDRLLARFPahrplSFEYDVFPTLLAQgakIKVHAve-aPFLDIGTPETLAQAG 236 Synechocystis s...
ZP_02735762  160 TQFREKELgav---ggGWVNSGVYVIGRELLARVPagevvSLERDVFPAALRDgltLAAFPqg-aAFHDIGTPDALREFV 235 Gemmata obscuri...
AAP58528     154 LAYDKAQPtp----amRHIDYGLGAFRHSAFAAAAgd-aaFDLVSVYQALLARd-sLAGFEat-hRFYEIGSIAGLEETR 226 uncultured Acid...
YP_001820852 160 IRSYDKHEklp---qmQHIDYGLGMFRTAAFASFPaq-eaVDLAAVQKSLVTRg-eLMGYEvf-qRFYEIGSPAGLAELD 233 Opitutus terrae...
YP_595626    153 IDYNKTHKtd----kmQYIDYGLSCLHKKIFTDWKnt--tFDLSDVYTFLVKNr-aIVGYEvt-qRFYEIGSPHGLAALE 224 Lawsonia intrac...
ZP_02736474  157 LRYSKRDRtp----amTHIDYGLSLLRRGAVERIPeh-epSDLAELYTGLVDRg-eMVGLEvt-eRFYEIGSPAGLQEAE 229 Gemmata obscuri...
YP_001614385 159 VRYEKRRSgappdpalDHIDYGATALRREVVEALPad-apLGFEVVQRDLAARg-lLRAFAva-aRFHEIGSEQGLRDLE 235 Sorangium cellu...

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap