Conserved Protein Domain Family
lectin_VcfQ

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cd06900: lectin_VcfQ 
VcfQ bacterial pilus biogenesis protein, lectin domain
This family includes bacterial proteins homologous to the VcfQ (also known as MshQ) bacterial pilus biogenesis protein. VcfQ is encoded by the vcfQ gene of the type IV pilus gene cluster of Vibrio cholerae and is essential for type IV pilus assembly. VcfQ has a Laminin G-like domain as well as an L-type lectin domain.
Statistics
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PSSM-Id: 173888
View PSSM: cd06900
Aligned: 8 rows
Threshold Bit Score: 353.262
Threshold Setting Gi: 85712749
Created: 4-Mar-2009
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative metal
Feature 1:putative metal binding site [ion binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
BAC75489      420 QCFSDDFnrpn--leqDWVPFTSSGNf----tPRVVSNRLRLTeaignQATAVTYQRIFPAANNLVQVELDYYAWan--l 491  Vibrio choler...
YP_001100218  469 SCFVDSFdrangtpgnNWFVGNEGGSfg---nPSIVNNRLRLTdasaqVSTYATLQRIFPGAGNKVIVEFLQYSYg---- 541  Herminiimonas...
ZP_02196792   480 QLLVETFdsp---nadNWSVIGYGSSi----kPQVVNGRFRLNnntprQATASAYNYVFPSDRNYLEIEFDHFAYdg--- 549  Vibrio campbe...
NP_719630     283 ECFTDDFsrts--lgnDWAIKVLGSSt----pPSIVSNRLRITpasgnQATASTFQRLFPAENNLVTVEFDYYAWsp--s 354  Shewanella on...
YP_206033     513 TCYEDNFdsl----ttSWVTSRSSGSf----tPTVINGRLQLTqarraQSTASSYQYLYPALGNKIEVEFDYMAYg---- 580  Vibrio fische...
ZP_01043793   873 QCYSLNMagqv--fgnDWLSYSKDENyspklvEAHNEQYLELTdnqnnRATAVTLQKAFPGKGHRIEIEFKLYAWgsqsp 950  Idiomarina ba...
ZP_01116253   262 VCFTDNFdras--ldsDWAVTSRSGAfg---lPRIVNNRLRITdnsgnVSTAATLYRLFPSAGNRIVVEFDYYAYgd--- 333  Reinekea sp. ...
ZP_01311827   715 FCFSDNFdrds--lgdSWTIIKQDNFt-----PQVSNGKLILTssqgyISSGVTLKGSYPSQDNYVEIEFEHNAYg---- 783  Desulfuromona...
Feature 1                                                                     # #                 
BAC75489      492 tGNGADGVSLIFSDAT----VTPRTGGFGGSLGYAqrtdt------npntpGFAGGWLGIGLDEWGNFanptegr----v 557  Vibrio choler...
YP_001100218  542 -GSGADGMAVVLSDAA----QPPAAGAFGGSLGYApkqaslg---gdttheGFSGGWLGIALDEFGNYssntegrs--gg 611  Herminiimonas...
ZP_02196792   550 gIQGADGVALVLSDAN----VPLQTGAFGGPLGYGmklyknhsdeishdveGFAGGWIGIGIDEYGNFyregee-----n 620  Vibrio campbe...
NP_719630     355 sGTGGDGVAVILSDAA----VTPQPGSFGGALGYAqrnd---------gtpGFAGGWLGVGLDEYGNFsnpnegkvgrpa 421  Shewanella on...
YP_206033     581 -GNGADGLAIVFSDAE----VTPQAGAFGGPLGYGfknns------eavkpGFTGGWLGIGLDEYGNYskeggsk----n 645  Vibrio fische...
ZP_01043793   951 gFTGADGIALVLSDASrisnGNPRAGSYGGSLGYAqrng---------gvpGFQAGWLGIGFDEYGNFsqsnegr---vg 1018 Idiomarina ba...
ZP_01116253   334 pSDGGDGLALVFSDSE----IVPQPGGYGGSLGYAqkd----------gisGFAGGWMGIGLDEYGNFlnrndgnk--dg 397  Reinekea sp. ...
ZP_01311827   784 -GNGADGVVLVLSDAS----VVPVAGAYGGSLGYAnrt----------gedGFSGGWLGFGLDEFGNFsnptegr----n 844  Desulfuromona...
Feature 1                                                                                         
BAC75489      558 ggvgfRPQSITVRGSQA--------SNYRYLTHqtvspnid-------trntntpaPGDRYLIEIDsrnaSQVLLSIRRt 622  Vibrio choler...
YP_001100218  612 sapgiRADAVAIRGSGSg------yTGYAYLRGtgtlpvgid------nagsataaPGHRYRIVVDhsdgVHAWTSVERd 679  Herminiimonas...
ZP_02196792   621 lasdvMPNSVGVRGPGIkdingkwlKGYKYIRGrqfnqp-----------ldgrstIPHRYKVALTshrsGAKTLSVHRk 689  Vibrio campbe...
NP_719630     422 tlpyfRPQSVTLRGSAA--------ASYTYLAGtaanlnprv-----dvrststaaPNHKYRIKVDstipSQAWVSVERd 488  Shewanella on...
YP_206033     646 ynsynTAQSVVLRGSGAr------ySGYNYIAGtrvspdi---------dnnngynRTHRYRITIDstnrNNANVTVERs 710  Vibrio fische...
ZP_01043793  1019 gfdrlVPNRVGVRGADS--------TNYKFLDAsnelepaidspanqnpnsvfnpkPGHTYKVLIDgt-gDNPSIEVLRk 1089 Idiomarina ba...
ZP_01116253   398 gfttrVRETITIRGSGSg------tDGYNYITSngqvpgsnvlp--tslnptiennTGHRYRVTIDhangVNAWVRVERd 469  Reinekea sp. ...
ZP_01311827   845 ggsgrIRDAIAVRGHGDt------qNDYQYITGtsslnpgid------npsssspaPSYRYRFSIDtr-nDRTLLKVERd 911  Desulfuromona...
Feature 1                                                                  
BAC75489      623 rnnst------ttilnQYSIplnq-qgaiPEEFFLSLAGSTGASVNNHEIDNFRVCA 672  Vibrio cholerae non-O1
YP_001100218  680 ttgsgns--ygfvipvFDAKieag-qaavPTNWSLSYTGSTGGSANIHEIDSLQVCS 733  Herminiimonas arsenicoxydans
ZP_02196792   690 igvngr---weeviktFDILkegn-fnytPENFRISVTASTGDSTNTHEIDNFQVCA 742  Vibrio campbellii AND4
NP_719630     489 vrngqg---yqvlvpaFNARaipn-qgavPEDFYLSFTGSTGGANNNHEIDNFKVCA 541  Shewanella oneidensis MR-1
YP_206033     711 vvnaghapsfskvigpIDVLrpqynqdepPENFIMSLTGSTGQLYNTHEIDNFKVCA 767  Vibrio fischeri ES114
ZP_01043793  1090 ldengan-nnfvsilkLDNIqdq---pqmPEQVYLSFTGSTGGETNYHWIKDLSVCS 1142 Idiomarina baltica OS145
ZP_01116253   470 igsgf-----ndviatFDLLaqtg-qdaiPTRMYMTLTGSTGGATNAHEIDNLNVCA 520  Reinekea sp. MED297
ZP_01311827   912 tgsg--------ysteIDWTdvtq-tspaPENFRVSFTASTGASDNIHSIDDFAMNA 959  Desulfuromonas acetoxidans DSM 684

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