1TE7


Conserved Protein Domain Family
ASCH_yqfb_like

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cd06552: ASCH_yqfb_like 
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ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain during coactivation, RNA-processing and the regulation of prokaryotic translation.
Statistics
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PSSM-Id: 119344
View PSSM: cd06552
Aligned: 46 rows
Threshold Bit Score: 75.355
Threshold Setting Gi: 163736737
Created: 12-Aug-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1TE7_A         5 DITFFq---RFQDDILAGRKTITIRDe-SESh--FKTGDVLRVGrfed-------------dgyFCTIEVTATSTVTld- 64  Escherichia col...
YP_001104461 137 PALHMh--pAYLDAVRAGTKTTTVRV--HDPvspGPVRLVFDHGdgt---------------stRIDAVVTEVRAASlr- 196 Saccharopolyspo...
ZP_00380407  138 LLRFHp---GYYESTVSGQKTLTVRWqeSHS---PGPALAYFEHte----------------hgPLPVDITSVDTCRlse 195 Brevibacterium ...
ZP_01453467   10 DISNLvrhpKLVEAAVRGMKTRQGRD--GVY---AWPEETFELE--------------------GVTFVVTSLTRERlg- 63  Mariprofundus f...
ZP_01173730   10 RLVTVp---ADIEKVLKGEKTATRRN--GRY---ADIGEIMVLK--------------------DKEFIVTSVYSQTlg- 60  Bacillus sp. NR...
YP_001362134 134 RLRFRa---SHLPAVRDGSKRATLRL--DDP---VQVGPALLVFepartdtagdlnagdvddevTLAGRITSTTAKTva- 204 Kineococcus rad...
YP_325896      7 DALLPn--dHVKTAVLDGDITQLSRGasNRY---AEAGDTFELE--------------------GTTFEVTAVEERTlg- 60  Natronomonas ph...
YP_136895      8 EILPNd---HVQQMAAEGRVTQMHRG--HQY---ADEGDTFEID--------------------GTEFEVTDVTHRTlg- 58  Haloarcula mari...
ABQ75882      22 DALLPn--eHVKNAVRNGDITQLSRGa-TNKy--ASEGDTFSID--------------------EDVFVISSVDKRTlg- 75  uncultured halo...
ZP_02016437   47 DLLPNd---RVKQAALDGDVTQLHRG--NRY---GEEGDAFEVD--------------------GVTFELTEVTERTlg- 97  Halorubrum lacu...
1TE7_A        65 tLTEKHAEQENm-tLTELKKVIADIYPgq------tQFYVIEFKC 102 Escherichia coli O157:H7
YP_001104461 197 eLTDEDARRDGfddRQALLEALEFHYPgia---patQVDVVHFET 238 Saccharopolyspora erythraea NRRL 2338
ZP_00380407  196 lTPQLLHLREGs-sVDSYVANLRKHYPtmp---qdaRVDIVTFRL 236 Brevibacterium linens BL2
ZP_01453467   64 dMTDADAQAEGypnLAAYKDLILRMHKgmqw-npdaLVWVHRFRK 107 Mariprofundus ferrooxydans PV-1
ZP_01173730   61 eLTDEHARQEGfgsVEDYKQTILSYHKgmpw-lphmKVWVHEFKP 104 Bacillus sp. NRRL B-14911
YP_001362134 205 eISDEEAREDGfadAASVLPGLRNYYPhls---sddYVVLVRFDV 246 Kineococcus radiotolerans SRS30216
YP_325896     61 dLTDDDARREGspsLEAYRERMQRAHPggfe--wddESDILTYRF 103 Natronomonas pharaonis DSM 2160
YP_136895     59 dMTDEDAQREGsedLAAYKNRMKKVHGsfew-dddsEVVRHRFAP 102 Haloarcula marismortui ATCC 43049
ABQ75882      76 dLTDLDAQREGsesLTAYRERMQRVHTdgfe--wdpTNKILTYQF 118 uncultured haloarchaeon
ZP_02016437   98 dMTDEDAKREGspsLEAYKERMVHAHGgsfdwdddaDVVRHRFRR 142 Halorubrum lacusprofundi ATCC 49239
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