1D4B


Conserved Protein Domain Family
CIDE_N_B

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cd06537: CIDE_N_B 
Click on image for an interactive view with Cn3D
CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Statistics
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PSSM-Id: 119370
View PSSM: cd06537
Aligned: 4 rows
Threshold Bit Score: 155.844
Threshold Setting Gi: 49256140
Created: 21-Feb-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:putative heterodimer interaction sites [polypeptide binding site]
Evidence:
  • Comment:Based on the CAD / ICAD CIDE_N domains.
  • Comment:Although the CAD and ICAD CIDE-N domains are structurally similar, they bind one another asymetrically using different surfaces from each protein.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #        ## ##         #   #             # ##    ##                  # #   
1D4B_A     34 PQRPFRVCDHKRTIRKGLTAATRQELLAKALETLLLNGVLTLVLEEDGTAVDSEDFFQLLEDDTCLMVLQSGQSWSPTRS 113 human
AAH73503   34 AQRPFRVCNHDRTVRRGVTAGSLRELIARAMDVLFLSGVVSLVLEDDGTLLDREDFFETLEDGSVVMVLEKGQKWSPQKN 113 African clawed frog
EDM14279   79 PQRPFRVCDHKRTVRKGLTAATRQELLDKVVETLLLSGVLTLVLEEDGTAVETEDFFELLEDDTCLMALEQGQSWSPKSG 158 Norway rat
NP_034024  34 PQRPFRVCDHKRTVRKGLTAASLQELLDKVLETLLLRGVLTLVLEEDGTAVDSEDFFQLLEDDTCLMVLEQGQSWSPKSG 113 house mouse
Feature 1      
1D4B_A    114 G 114 human
AAH73503  114 I 114 African clawed frog
EDM14279  159 M 159 Norway rat
NP_034024 114 M 114 house mouse

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