1YW4,2I3C,3FMC,3CDX,4WCK,2O4H


Conserved Protein Domain Family
M14_ASTE_ASPA_like

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cd06230: M14_ASTE_ASPA_like 
Click on image for an interactive view with Cn3D
Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily
The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Statistics
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PSSM-Id: 349449
Aligned: 39 rows
Threshold Bit Score: 93.5305
Created: 13-Dec-2007
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteactive site
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:[H] [ED] [H]Click to see conserved feature residue pattern help
Evidence:
  • Comment:Metallocarboxypeptidases share the zinc binding motif HXXE...H, where the zinc ion is penta-coordinated to ND1 atoms of the histidines, OE1 and OE2 atoms of the glutamic acid, and to a water molecule in a slightly distorted tetrahedral manner.
  • Structure:1YW4_A: Chromobacterium violaceum succinylglutamate desuccinylase bound to zinc; contacts at 3.5A
  • Structure:2O4H_A: human brain aspartoacylase bound to zinc; contacts at 3.5A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               #  #                                                                     
1YW4_A        49 VLLSCGVHGNETAPIEVVDGXLTDIaagq---lalnCRLLVXF-ANLDAIRqgVRYGn------YDXNRLFngaharhpe 118 Chromobacterium...
EAW40453      73 LALLAGVHGYEYPPITALQSIRSEIdpt-----llrGTVILVHvANLPSFL--GRTIyyspvdgKNLNRMFpgdpe---g 142 marine gamma pr...
YP_001034494  42 LTISAAVHGCEYVGVKALMDLAHEWdfn-----fqgSVLLLHA-VNVSGFWa-RETTlvp-edgLNLNRIFqdqepv--s 111 Streptococcus s...
PAW84329      22 LLITGGVHGDEFEPMAAIRRLIADFdqnpaltatlhGRLTLVPvVNEAAFVrgHRVAed----qLDLARTCpgrpd---g 94  Pedosphaera sp....
SEQ46022      58 LLVFAGVHGDEYDGIETLIKLYRKLnpe-----einGTLVMIPvANVSSYRhiSRVSrv---dgENLARMFpgnpe---g 126 Virgibacillus s...
SFJ53540      43 LWLQACIHGPEVVGPLSIQRFLGTVdlk-----qlsGRVICLMlANPLGFRgyNRLTpq---dgYNLNRVFpgdps---g 111 Bosea sp. OK403
PAW68457      44 LLVNGATHGDEYEGPTLLRAWAETWrpk-----nlrGTVVAVPvLNEAAFFagQRCHpa---dgGNLARAFpgsar---g 112 Opitutae bacter...
SDT21054      32 VVILGGVHGNEVGGILAAARLTRLPlpl------raGRLRVVPvTHEAAYEadTRVGpg---dgLNLARVFpgrag---g 99  Jiangella sp. D...
SFI15672      31 VLLLAGVHGDEYEPMIALVELADELart-----irrGRVTIDPlVNAGAYVkrNRLGdd----gLDLARVCpgset---g 98  Parapedobacter ...
OGG54430      48 LLVIAGVHGDEYEGVEAIPGVFSRIdpk-----alrGTLLTVPvCNVPAYEaaTRSSpl---dgLNLARVFpgdan---g 116 Candidatus Hand...
Feature 1                                      #                                                 
1YW4_A       119 lpesVRAAELETLAaeffagararkLHYDLHTairgs----vfekFAIYPFlhdg-------rthkREQLAWLqrc--gi 185 Chromobacterium...
EAW40453     143 tlsqRIAHQITTKVidq------adYLIDLHSgdgne----alrpYVYMPVtgdtv-----fdqkiKGMAVAFg------ 201 marine gamma pr...
YP_001034494 112 slsyQIRSVIESQVfsv------sdFLIDLHSgnre------ellTPHGYYslranp---evmeksYQMLQASg-----t 171 Streptococcus s...
PAW84329      95 titeRTAHALSELIrs-------adAYIDLHTggtela-vfpmtgYVMHPRlevl--------atqRRMARAFn------ 152 Pedosphaera sp....
SEQ46022     127 lytaRLAWYLKEKFirh------adFFLDLHSgsaelsmppfvgyYDFNDEtgr----------rsKEAAEIFg------ 184 Virgibacillus s...
SFJ53540     112 hlsyQLAHRLLDLSlth------sdAMLDLHSggdlt----itchYTLFHNngtpe------glesERMARATg------ 169 Bosea sp. OK403
PAW68457     113 gvtaRLAHLFDTHLlaq------atHYVDLHSag---------aaYELLPWtgyithpapatdrtqRAMAASFaefwcwa 177 Opitutae bacter...
SDT21054     100 sateRLAHLVTEELlrt------adVLVDLHTsspdt---dmplfAGCLDDgsda-------adraVRLALAFg------ 157 Jiangella sp. D...
SFI15672      99 ssseRAAHAVSQRIrq-------adAVIDLHTggla------leiYPLVGYmlhpdr---qvlaqqQQLAVATg------ 156 Parapedobacter ...
OGG54430     117 svtqRIAFWVTERLlkg------adLLIDLHSggvtyh-mptlvgYSHSEDel-----------grRSLAAARdf----g 174 Candidatus Hand...
Feature 1                                                                      
1YW4_A       186 EAVLLHtqp-------anTFSYFTSqyceaDAFTLELgkarpf-gqndlSRFSGIDGALRGL 239 Chromobacterium violaceum ATCC 12472
EAW40453     202 LDHIVIdtgpqyasgpslFSDQTALvr-giPAITTETgqsg----sndpHWSELAKSGIWNV 258 marine gamma proteobacterium HTCC...
YP_001034494 172 PIIYRSqd--------rgNLYHAASvdyglPSILLEQgengtclpedvlAMKESIKQVARYL 225 Streptococcus sanguinis SK36
PAW84329     153 LPVIWGtspele-grslsVARDAGV-----PAIYAEHhgaa----acraEGVEAYVAGCWNV 204 Pedosphaera sp. Tous-C6FEB
SEQ46022     185 MEVIWGhqdips-grtlsVATELGI-----PWLYTEAyggr----rvreKEQKKFEEGVYRL 236 Virgibacillus subterraneus
SFJ53540     170 SPNIWNsleeglsgchftHYTKGGK-----PSLIVESggga----rvtpEDLDRLTLAIFNV 222 Bosea sp. OK403
PAW68457     178 GPFLPGrt--------lsAAHARGI-----PAIYVECrgag----gvapADLENLDLGLRRV 222 Opitutae bacterium Tous-C1TDCM
SDT21054     158 APVVWThgalgp-grtltVAQELGI-----PAIYAESpvgg----vldeRYLDAYVSGVRRV 209 Jiangella sp. DSM 45060
SFI15672     157 MPLIWGtdhrpd-grtlsVARDAGV-----PAIYLEYgggs----gfreQVADRYKDAVRRV 208 Parapedobacter sp. RK1
OGG54430     175 APILWGhpppvppgrsisAAVDLGV-----PWLYAEAaggg----farpEDVALYRDGVLRV 227 Candidatus Handelsmanbacteria bac...

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