Conserved Protein Domain Family
PWWP_GLYR1

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cd05836: PWWP_GLYR1 
PWWP domain found in glyoxylate reductase 1 (GLYR1) and similar proteins
GLYR1, also called 3-hydroxyisobutyrate dehydrogenase-like protein, cytokine-like nuclear factor N-PAC, nuclear protein NP60, or nuclear protein of 60 kDa, is a putative oxidoreductase that is recruited on chromatin and promotes KDM1B demethylase activity. It recognizes and binds trimethylated 'Lys-36' of histone H3 (H3K36me3). GLYR1 enhances the activity of MAP2K4 and MAP2K6 kinases to phosphorylate p38-alpha. In addition to the PWWP domain, GLYR1 also contains an AT-hook and a C-terminal NAD-binding domain. The PWWP domain specifically recognizes DNA and histone methylated lysines.
Statistics
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PSSM-Id: 438961
Aligned: 36 rows
Threshold Bit Score: 116.165
Created: 1-Feb-2008
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Feature 1:putative methyl-histone binding site [polypeptide binding site]
Evidence:
  • Comment:the aromatic residues form the three-walled methyl-lysine cage that directly participate in histone methylated lysine binding and recognition.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #  #                           #                                   
Q49A26          6 LRLGDLVWGKLGRYPPWPGKIVNPPKDLKkpr----gkKCFFVKFFGTEDHAWIKvEQLKPYHAHKEemi-kinKGKRFQ 80   human
XP_009019967    5 FKLGDIVWAKMKGFPPWPGKVCHPMPDVKkpa---dkrPKQFIFFFGSENYAYVLeETIWPFTKFKElyktpsrMLRGFQ 81   Helobdella ro...
XP_009028237    6 FEVGDLVWAKMKGFPPWPGKVSKAPENKKvnd----kkPRCYIFFFGSENYAFVSyDNVWPYLEKRDeyatlprPSHSFQ 81   Helobdella ro...
ENN71995       96 FKENDFVWAKMAGYNHWPAIVMRPDPDAPikt----ikEMQWIYFLGTHNYAWIEdKNIKPYEEFKLq-----yKKKNTE 166  mountain pine...
Q7Q161          7 YAVNDLVWAKMKGFSPWPGRISVPPAELRkiav-kknnPVKCIFFFGSNNYAWIEeTQIKPYLQFKDthl-nssKSAQFK 84   African malar...
XP_026475249    5 FNIGDLVWAKMKRFPSWPGRVSNIPPKLKkpk---nsaGLHCIYFFGSNNYGWIEeTFLIPYLEGKEkli--xcKTAAFK 79   cat flea
KFM74966        6 LEVGDLVWAKMKGFPAWPAKIIEPPADAKssk---pkkEHHYVYFFGSDNHAWIMdDNIVPHTDSMLetg-gkkRSAALQ 81   Stegodyphus m...
XP_014280428    3 FINGDLVWAKMKGFPPWPGLVSHPPDGLMegtlfktdvKYSCIYFFGTHNYGFIEhNQLQPYLPNKEkml-kisKSAKFK 81   brown marmora...
XP_014239386    5 YKLGDLVWAKMRGFPPWPGMISEPPEDMTnkp----kkPSNWIYFFGSKNYSWIDvSNLNPYKPQALdl---kkSSKAFK 77   bed bug
CRL00964      572 LNVGDFVWAKMKGFPAWPGRVVEPNDSLQklq---kaeKSKCIYFFGSHNHAWIEdSNIKPYNESKDqmlklgkGKASFA 648  Clunio marinus
Feature 1                   
Q49A26         81 QAVDAVEEFL 90   human
XP_009019967   82 EAVEIAEKLD 91   Helobdella robusta
XP_009028237   82 EAVDAIDDYI 91   Helobdella robusta
ENN71995      167 AAMEEMDDII 176  mountain pine beetle
Q7Q161         85 EALKQIEEFR 94   African malaria mosquito
XP_026475249   80 EAIKQIDAYI 89   cat flea
KFM74966       82 KAVEAILNYS 91   Stegodyphus mimosarum
XP_014280428   82 QACSEIEEHY 91   brown marmorated stink bug
XP_014239386   78 EACEAIEDVY 87   bed bug
CRL00964      649 KAIKEIEDFM 658  Clunio marinus

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