Conserved Protein Domain Family
RasGAP_GAPA

?
cd05132: RasGAP_GAPA 
Ras-GTPase Activating Domain of GAPA
GAPA is an IQGAP-related protein and is predicted to bind to small GTPases, which are yet to be identified. IQGAP proteins are integral components of cytoskeletal regulation. Results from truncated GAPAs indicated that almost the entire region of GAPA homologous to IQGAP is required for cytokinesis in Dictyostelium. More members of the IQGAP family are emerging, and evidence suggests that there are both similarities and differences in their function.
Statistics
?
PSSM-Id: 213334
Aligned: 14 rows
Threshold Bit Score: 513.824
Created: 29-May-2007
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
putative RAS
Feature 1:putative RAS interface [polypeptide binding site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                          #                              
AAT74386      143 EIDTLLQTVMFTLYGNqYESREEHLLLTMFQSvLSAQFEtatefgsllRANTPVSRMMTTYTRRGPGQSYLKSVLAERIN 222  Schizophyllum...
462156        147 NMDALLQIVMFNIYGNqYESREEHLLLSLFQMvLTTEFEatsdvlsllRANTPVSRMLTTYTRRGPGQAYLRSILYQCIN 226  fission yeast
EGG15734      991 EIDNLLQTVMFTLYGNqYEENEEHLLLSMFQKvLMEEFKeatsigsllRANTALTRMMTTYTRRGPGQQYLKQSLTKPLE 1070 Dictyostelium...
EFA78579      312 EIDNLLQTVMFTLYGNqYEENEEHLLLSMFQKvLAEEFKeatsigsllRANTALTRMMTTYTRRGPGQQYLKHSLTKPLE 391  Polysphondyli...
EGP86577      138 EIDQLLQTVMFTIYGNqYESREEHLLLTMFQSvLTYQFDntpdyssllRANTPVSRMMTTYTRRGPGQSYLKTVLADRIN 217  Mycosphaerell...
EEH17322      195 EIDSLLQTVMFTIYGNqYESREEHLLLTMFQSvLTYQFDntpeyssllRQNTPVSRMMTTYTRRGPGQAYLKQVLADQIN 274  Paracoccidioi...
EFW43562      117 DIDGLLQTVMFTLYGNqYESREENLLLSMFEEaIDMGSLm--------RANTAVSRMMTTYTRRVPGQEYLKLALADQLK 188  Capsaspora ow...
EGD77043      543 EIDDFLQTVMFSLFGT-YEPREEHLLLKMFEHaLQLEYSnakdpgsvmRSNTAISRMMTTYTRRGLGQQYLKDALKAQVD 621  Salpingoeca s...
EGF83071      173 EIDTLLQTVMFTIFGNqYEAREEYLLLSMFQNvLSAEFEgatdfgslmRANTPISRMMTTYTRRGPGQSYLKNVLAERLN 252  Batrachochytr...
XP_002143068  145 EIDSLLQTVMFTIYGNqYEQREEHLLLSMFQAvLAYQFDttlefssllRANTPVSRMMTTYTRRGPGQSYLRETLSHCLN 224  Yarrowia lipo...
Feature 1         # # ##  #  #   #                                                                
AAT74386      223 SLIEHKdlNLEINPVKVYEQMINqieeetgslppNLPRGVPPEVaqenpdvqaiIAPRLTMLMEIANSFLLTIIESMESV 302  Schizophyllum...
462156        227 DVAIHPdlQLDIHPLSVYRYLVNtgql----spsEDDNLLTNEEvsefpavknaIQERSAQLLLLTKRFLDAVLNSIDEI 302  fission yeast
EGG15734     1071 LITNHKdlNLEINPSTVYENYINeyetk-tgkisTLKRKVPPEEcasnpevqgiLQPRVQKLIEIGDTFIESIIGSIDSV 1149 Dictyostelium...
EFA78579      392 AITSNKdlSLEINPSIVYEDHINeyetq-tgkpsPLKRKAPPEEcaqngavqniIRPRIENLVSIGDKFIESIISSIDLV 470  Polysphondyli...
EGP86577      218 SLIEIKdlDLEINPLKVYESMIGkieadggklpaNLPKGITAEQaaanenvqriIAPRIEMLNEIAKSFLDTIIDGLDET 297  Mycosphaerell...
EEH17322      275 SLIDLNdiDLEINPLKVYESMVQqielstgtlppSLPKSVTAEVaaeneqvqkiIVPRLKMLTDIANGFLETIIEGLEET 354  Paracoccidioi...
EFW43562      189 RLMSTKdlNLEIEPSKIYEQMLNddeas-tgettTMQRGLTNEQalaiprvqriLEQRVSDLKRITLEIVTAITSSVDVV 267  Capsaspora ow...
EGD77043      622 LVYNLDdvPLETDPAKVYRELEGdsvdlppmpasSEETFNIPQVke-------aVEERAEMLQELTDRFIKAIARSVNTI 694  Salpingoeca s...
EGF83071      253 KMIELKdlDLEINPLKVYDQMIKdieia-tgqtcNLPRGITAEAalkntdvqaiIAPRVRTLIEIGNSFLAVIMNSLKQV 331  Batrachochytr...
XP_002143068  225 DIISNPq-TLEINPMRVLIETDSapd------mtMDQAAENPEVia-------iIEPRLRTLEAICENVLSTIINSKSIV 290  Yarrowia lipo...
Feature 1                                     #       ##  ##  #                     #  ##  #   # #
AAT74386      303 PYGIRWICKQIRSLTRRKYPEaTDYAICSLIGGFFFLRFINPAIVTPQAYMLVEGVPAK-HPRRTLTLIAKMLQNLANKP 381  Schizophyllum...
462156        303 PYGIRWVCKLIRNLTNRLFPSiSDSTICSLIGGFFFLRFVNPAIISPQTSMLLDSCPSD-NVRKTLATIAKIIQSVANGT 381  fission yeast
EGG15734     1150 PYGIRWICRQIRELVKTKFPQaTRAQTCGLIGGFFLLRYINPAVVSPQAFMLVDAKLSN-NTKKNLTYPAKMMQNLANNI 1228 Dictyostelium...
EFA78579      471 PYGIRWICKQIRELVKVKFPSaTRAQSCGLIGGFFLLRYINPAVVSPQAFMLVEAKLSN-NTKKNLTYPAKMMQNLANNI 549  Polysphondyli...
EGP86577      298 PYGIRWICKQIRSLTRRKYPDaSEQTICTLIGGFFFLRFINPAIVTPRSYMLIEQTPAE-NPKRTLTYVAKMLQNLANKP 376  Mycosphaerell...
EEH17322      355 PYGIRWICKQIRSLSKRKYPDaQDQTICTLIGGFFFLRFINPAIVTPRSYMLIEATPAD-KPRRTLTLIAKMLQNLANKP 433  Paracoccidioi...
EFW43562      268 PYGIRWLCRKIRQMMKQHYPEsTPENAASLIGGFFLLRFINPAIVTPTAYMLLTDKPSS-VASRNLTLVAKVLQNLANKP 346  Capsaspora ow...
EGD77043      695 PYGVRWLCKTIRNLCRSRFEGvNRDVIYSHVGGFFLLRYINPAIVSPEAFGIVHRKPSS-YTRKTLTQIAKLLQNIANNT 773  Salpingoeca s...
EGF83071      332 PYGIRWICKQIRSLTKRKYSDaSDSQICSLIGGFFMLRFINPAIVTPQAYIIVDGTPQK-NTRRTLTLLAKLLQNLANKP 410  Batrachochytr...
XP_002143068  291 PYGIRWICKQIRGLARRKYPDaPDASVCSLIGAFFFLRFINPAIVSPQTYMLIDKLPNDaNCRRTLTLVAKVLQNIANKP 370  Yarrowia lipo...
Feature 1              ##                                                                         
AAT74386      382 SYs--KEAYMMTLNPFVDNNKARINQFLNNLCEVGDFYDTLEMDQYMALSKK--DLMIHITLNElyNTHSLILQHi---- 453  Schizophyllum...
462156        382 SSt--KTHLDVSFQPMLKEYEEKVHNLLRKLGNVGDFFEALELDQYIALSKK--SLALEMTVNEiyLTHEIILENl---d 454  fission yeast
EGG15734     1229 EFggvKEFFMAPLNTFLDRNKERLNDFLEQLTNVDNLNDHLSLDKYIALGRVgdSISINITLNEmyFIHSLLEQHi---- 1304 Dictyostelium...
EFA78579      550 MFggvKEFFMEPLNVFLEKNKDRLNDFLELLTKVDNLSDHLNLDKYIALGRVgdNITINITLNEmyFVHSLLEQHl---- 625  Polysphondyli...
EGP86577      377 SYa--KEPYMQRLAPFIEDNKERINRFMLDLCEVQDFYETLEMDNYVALSKK--DLELSITLNEvyAMHMLIEKHq---- 448  Mycosphaerell...
EEH17322      434 TYa--KEPYMAKLQPFIHENKERVNKFLLDLCEVQDFYESLELDNYVALSKR--DLELQITLNEvyATHALLDKHsatla 509  Paracoccidioi...
EFW43562      347 NFq--KEPYMLPLSEFTTEYQPKLQQFLFKLCEVDDFFDALEMDLYKALTAK--ETVVNITLNEmyNMHRLLKQHl---- 418  Capsaspora ow...
EGD77043      774 AN---RTVLMTILRPYVQQQRAQLNALFDDICDVDDFYDEHKLEMIDALTSM--DRTLSITPNElsSVHKLLVKYv---- 844  Salpingoeca s...
EGF83071      411 SYa--KEPYMMALAPFIEHNKPIFNQFLNELCEIGDFNESLEMEQYIALSKK--EIDLNITMNEihNTHGLLAQHm---- 482  Batrachochytr...
XP_002143068  371 TTs--KEPYMASLTPFLEVNKNRVNKFLNELCEVPDFYESLEMDQYIALSKK--DLSISITLNEiyGMHGLLVKY----- 441  Yarrowia lipo...
Feature 1                                                   
AAT74386      454 ETLSPNEKQHLriltdELGPAPPQVPRKENRTIELSLYSRWE 495  Schizophyllum commune
462156        455 NLYDPDSHVHLil--qELGEPCKSVPQEDNCLVTLPLYNRWD 494  fission yeast
EGG15734     1305 HTLAPDPVDPLriilaDLGPAPAQLPRTENANVELKLANRFE 1346 Dictyostelium fasciculatum
EFA78579      626 GVLAPEPNDPLrlilsDLGAAPAQLPRSENANVELKLTNRFE 667  Polysphondylium pallidum PN500
EGP86577      449 IELAREETSHLsqllsELGPAPVQLPRKENRAINLPLYSKWE 490  Mycosphaerella graminicola IPO323
EEH17322      510 AQDQHSHLSHLl---qELGPAPPQLPRKENRTINLPLFSKWE 548  Paracoccidioides brasiliensis Pb03
EFW43562      419 DELVPEKDNHLrlivdDMSAAPEQLSRKDNRTVALSLFSRFE 460  Capsaspora owczarzaki ATCC 30864
EGD77043      845 GQLDLEAADPLacimqELPPPPDRISRDDNAVFQLKLESRFE 886  Salpingoeca sp. ATCC50818
EGF83071      483 DILAKSHLRICl---vDLGPAPPQVPRLENKQISLQLFSRWD 521  Batrachochytrium dendrobatidis JAM81
XP_002143068  442 ISDTKDVHLQKvm--gDLGTCPALVPRAQNATIDLSLFSQWE 481  Yarrowia lipolytica CLIB122

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap