1CJA


Conserved Protein Domain Family
AFK

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cd05124: AFK 
Click on image for an interactive view with Cn3D
Catalytic domain of Actin-Fragmin Kinase
AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating actin polymerization. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270694
Aligned: 17 rows
Threshold Bit Score: 189.482
Created: 27-Apr-2007
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
ATP binding
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:1CJA; Physarum polycephalum AFK binds AMP; defined at 4A contacts.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               # ## # #                          # #                                    
1CJA_A        70 QFKGIERSEKGtEGLFFVETes----------------gVFIVKRSTNi---ESETFCSLLCMRLGlhAPKVRVVSs--- 127  slime mold
Q8L613        69 PLEVTVNSGGVvFFALFNSSsseda---------srkeeAAVIKFASSrmatQSERLGYEFSKWLGvqIPQARVIHs--- 136  thale cress
CAK80744      54 QIKSIKLSDSGsRGVLFIDSen----------------gAIVLKLSGQv---SVELYLNKLAQALDikTTQMKCLKw--- 111  Paramecium tet...
CAK60521     492 DLRAIALSDSLdKGAIFVETne----------------gSVVVKGYPNi---AQGYFFSQLAIVLGipVPNKRIVRw--- 549  Paramecium tet...
EFW41146     116 DVIGVDRSEGGaGGVFFVQTkr----------------gAVVIKASRTl---APELFASLLCLRLQvaAPRSRVVSt--- 173  Capsaspora owc...
ELR12755      66 KVSAFCRSGVGsAGVFFVKVpe----------------gVAVVKGCDSv---VEEVFAALLAERVGirVPRVRVLEy--- 123  Acanthamoeba c...
EJY87928     161 VLSVYCAKSSS-SGVFFASQvh----------------gAFVIKACADv---VSSHFASKLYQKLQipTPDIRVLCh--- 217  Oxytricha trif...
EGD73156     116 GVRGVQRSSAGsEGVFFVAFrdt--------------deAVVIKGSRNi---AAEAFAGFLALKLGlkSPDFRIISv--- 175  Salpingoeca sp...
XP_002671680  67 NIQNVFLSSNQtSGILFVETqek--------------dhVVVVKATSTi---AQEIYGGKIAEFLGlkTPQVKLMEyrad 129  Naegleria grub...
XP_001767164  50 SIEMTVNSGGVvYFAMFRKNhvesgnddseenenikyeaAAVFKFGSSrlatQSERLGIEIARHLGvaTPQARVIHn--- 126  Physcomitrella...
Feature 1                                                             ####   #  #                
1CJA_A       128 ----nSEEGTNMLECLAAi--------------dKSFRVITTLANq--aNILLMELVRGITLNKltttsa---------- 177  slime mold
Q8L613       137 ----cNPEWTLIKEATEKaqakatsegdevgemtCSELLEALELSr---CLLLMSYVHGCPMLEsmssfe---------- 199  thale cress
CAK80744     112 ----lDLEMQELRNDILFaas----------sdeVLSHRLKQKLKa--aYFEMVEYVPGLQLYYfqgera---------- 165  Paramecium tet...
CAK60521     550 ----dSSEFKVLTKELQRatf----------mlkQLHQKITNRLEn--pYLEIQEYLPGITLSYmgkaragki-----fn 608  Paramecium tet...
EFW41146     174 ----sSEEGAQLLASLKQv--------------dPSWRVITNLFDq--aCLLVQDYIPGTVLSGldyttatavfgseved 233  Capsaspora owc...
ELR12755     124 ----tSREWRQAKWAIRSkaeaa-------dptgVDALKVEKELDr--pFIMVMEFVKGKDLEQlgpqaks--------l 182  Acanthamoeba c...
EJY87928     218 ----hDKEFKFMLHSLERvsf----------hddTLRYMIRIHMDr--pFILLQEYIPAVSLQNmgqkradrc-----fn 276  Oxytricha trif...
EGD73156     176 ----aAREAQAMMHTFRE----------------VDHLGLAHAVLskqsFLLIKNFVRGVNLGQvkeadlikvf--gepg 233  Salpingoeca sp...
XP_002671680 130 fknpiKKYWADCKKYLKEftvk--------ygmsVEQRKIEKELFr--aFFLLMEFIEGATSLDdimsdesi-------g 192  Naegleria grub...
XP_001767164 127 ----nSSEWMQIQDAVVAvretdkanenviglqtCEELLEALHLSr---CMLIMGYIRGKPLAEskqafa---------- 189  Physcomitrella...
Feature 1                                                  #                    ##               
1CJA_A       178 -pevltKSTMQQLGSLMALDViVNNSDRLPIa--WTNEGNLDNIMLse--------rgATVVPIDSKIIpl--------- 237  slime mold
Q8L613       200 -teekaERAAAALGRILVLDLvIRNEDRLPCr-qLRWRGNPANLLLtdriv---ssakHHECSFDEAFDs---------- 264  thale cress
CAK80744     166 -kiifnQERLFSLGKIIGFDIfIHNGDRFPLp-iWRSVGNAYNVILkvi-------deKQEDMFNFNNTnl--------- 227  Paramecium tet...
CAK60521     609 fydpqsRHRLIKVGFLMGLDIfINNPSRFPLe-iWKNSGNSEHMIVrtep----rytdTTKDLHDIDNLsf--------- 674  Paramecium tet...
EFW41146     234 natpeeAERIRSLGRLLVVDTlLNNGDRLPLf--WDNQGNPSNIMIsra-------naHSFVSIDTRLTgiaesspllap 304  Capsaspora owc...
ELR12755     183 fespdgPRLFREMGRLVCLDIvTNNWDRLPIi--WDNDGNFRNLYLeqregkdhhrtkWSVVGIDQGITavkre---vhp 257  Acanthamoeba c...
EJY87928     277 vaypdaSNRLINIGKIIAADCcVNNPDRMPMi--WDNHGNSTNLLFei---------nTDEKIDDEKIAnmdy----sdf 341  Oxytricha trif...
EGD73156     234 aftdggRERFKELAALLLLDVlCNNGDRFPLi--WDNRGNPGNVMFar--------snGQVIAIDNNICavdea---tya 300  Salpingoeca sp...
XP_002671680 193 ksllenEQVCEDFGGMIVLDIiLNNCDRLPLdliWNHEGNSSNILFsp--------klQRLVLIDQAFMaii------ne 258  Naegleria grub...
XP_001767164 190 -sekvaVKTAIALGRTLVLDMvLRNEDRLVCh-tLGWRGNSGNLLV------------TEEVPHGLDQLgpp------vl 249  Physcomitrella...
Feature 1                                                                                        
1CJA_A       238 dASHPHGERVRELLRtliah---------------pghesSQFHSIRDIITLytgydvgt-----------egsismqEG 291  slime mold
Q8L613       265 aIKRYHPKDYRSIQRerrassvdsrs----rlsisdqmlvSQASDFSDITESprsydtglms-------pmsdrsvaaDF 333  thale cress
CAK80744     228 nFECFYSIDPQTILK-------------------------QHDSSIQDKILNayie------------------kvqkFL 264  Paramecium tet...
CAK60521     675 dYEYIYGLDSYSFERp-----------------------pSYYTNVEEFLNKv-------------------------FL 706  Paramecium tet...
EFW41146     305 yISRVAALTARVLGKndkvldafstlrqliasyiafdigeKGARAMQEGFESa------------------------vRE 360  Capsaspora owc...
ELR12755     258 eGHDKYMSRVESLVVhiatr---------------pgeeaEELQRFRDCIRTelaidlrp-----------sdsleiqAG 311  Acanthamoeba c...
EJY87928     342 qFSTSVAIDNKTFSIhqr--------------------dkGQINYLKDYLKRiesfve--------------avfqdlRL 387  Oxytricha trif...
EGD73156     301 dQHREYLSKVENLIHltarht-------------degteaPQFHRVRDKVIEycnydygld---------gslliqqeFL 358  Salpingoeca sp...
XP_002671680 259 gQKQTYFKKIESFSKccsee---------------tlsnnPYLDQVVDYIYNctgykmsd-----------qakenihKG 312  Naegleria grub...
XP_001767164 250 dSKQISGGSGFTRQRr-----------------------tQSLAALSTSSNTdilvqlpkmhrspspelshagtaqshAL 306  Physcomitrella...
Feature 1               
1CJA_A       292 FLATVRE 298  slime mold
Q8L613       334 HLVAIDS 340  thale cress
CAK80744     265 QDLCDDI 271  Paramecium tetraurelia
CAK60521     707 EMKSIMQ 713  Paramecium tetraurelia
EFW41146     361 CIAQRVA 367  Capsaspora owczarzaki ATCC 30864
ELR12755     312 ILETVKE 318  Acanthamoeba castellanii str. Neff
EJY87928     388 IINGDVA 394  Oxytricha trifallax
EGD73156     359 HLVQDVP 365  Salpingoeca sp. ATCC50818
XP_002671680 313 ILKSIEK 319  Naegleria gruberi strain NEG-M
XP_001767164 307 QLKMKDK 313  Physcomitrella patens subsp. patens

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