2GS6,2GS7,3BBT,3KEX,3PP0


Conserved Protein Domain Family
PTKc_EGFR_like

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cd05057: PTKc_EGFR_like 
Click on image for an interactive view with Cn3D
Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases
PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. They are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. The EGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270648
Aligned: 10 rows
Threshold Bit Score: 478.063
Created: 17-Jul-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:includes ATP binding and substrate binding sites
  • Structure:2GS6; Human EGFR tyr kinase binds ATP analog and peptide substrate; defined at 3.5A contacts.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                               ##  ##                              #                  
2GS6_A      12 LRILKETEFKKI-----------KVLGSGAFGTVYKGLWIPeg---------ekVKIPVAIKELREATs----------- 60   human
2GS7_A      12 LRILKETEFKKI-----------KVLGSGAFGTVYKGLWIPeg---------ekVKIPVAIKELREATs----------- 60   human
3BBT_B       9 LRILKETELKRV-----------KVLGSGAFGTVYKGIWVPeg---------etVKIPVAIKILNETTg----------- 57   human
3KEX_A       7 ARIFKETELRKL-----------KVLGSGVFGTVHKGVWIPeg---------esIKIPVCIKVIEDKSg----------- 55   human
3PP0_A      11 LRILKETELRKV-----------KVLGSGAFGTVYKGIWIPdg---------enVKIPVAIKVLRENTs----------- 59   human
6175066    930 LRIVKDAELRKG-----------GVLGMGAFGRVYKGVWVPeg---------enVKIPVAIKELLKSTg----------- 978  fruit fly
BAE06395   115 LRIVKEAELRIG-----------KILGSGAFGTVHKGYWIPdlap------rerVKVPVAIKVLRDESs----------- 166  Ciona intestinalis
BAE06394   827 LRIVKESELEFR-----------KMLGSGAFGTVQKAIWTPlniq------gekVKIAVAVKTLKTSEdl---------- 879  Ciona intestinalis
AAA29866  1001 SREPNMGRLEMInqddlfcdfnsAPLGTGSFGAVYKGVWKVpkhallrynwhrgAQLDVAIKVILNDSpecsvtanpssp 1080 Schistosoma mansoni
BAA81724   833 LIITPETALEQG-----------QVLGSGAFGTVYKGHWRPeg---------dpNCYEVAIKVLKEETat---------- 882  Ephydatia fluvia...
Feature 1                                                               # #   #                
2GS6_A      61 ------------------pKANKEILDEAYVMASVDNPHVCRLLGICLt-sTVQLITQLMPFGCLLDYVREHKDN--IGS 119  human
2GS7_A      61 ------------------pKANKEILDEAYVMASVDNPHVCRLLGICLt-sTVQLITQLMPFGCLLDYVREHKDN--IGS 119  human
3BBT_B      58 ------------------pKANVEFMDEALIMASMDHPHLVRLLGVCLs-pTIQLVTQLMPHGCLLEYVHEHKDN--IGS 116  human
3KEX_A      56 ------------------rQSFQAVTDHMLAIGSLDHAHIVRLLGLCPg-sSLQLVTQYLPLGSLLDHVRQHRGA--LGP 114  human
3PP0_A      60 ------------------pKANKEILDEAYVMAGVGSPYVSRLLGICLt-sTVQLVTQLMPYGCLLDHVRENRGR--LGS 118  human
6175066    979 ------------------aESSEEFLREAYIMASEEHVNLLKLLAVCMs-sQMMLITQLMPLGCLLDYVRNNRDK--IGS 1037 fruit fly
BAE06395   167 ------------------qVASNEILDEAFVMASCEHPNLVRLLGISLs-qRIMLITQLMPLGNLLEYVRDNKDN--IGS 225  Ciona intestinalis
BAE06394   880 -----------------lqSANNEIMDEAYMMASVECPYLVRLLGISMt-eQVALITQLMPLGSLLEYVRNPTTRdsIRS 941  Ciona intestinalis
AAA29866  1081 feagnssyseeeakrasvrANIEELLQEAKIMASVMHRHCLPLIGICLsseRHCLVSIFVELGALDRYVKQHADE--LNS 1158 Schistosoma mansoni
BAA81724   883 ------------------pQSQTELLREGAVMATMDHINVVRLYCVCMg-kQMMLITEFVRLGSLLSYLKNNQAT--LDA 941  Ephydatia fluvia...
Feature 1                                    ##            #                     #####    #   #
2GS6_A     120 QYLLNWCVQIAKGMNYLED-RRLVHRDLAARNVLVKTpQHVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMALESILHR 197  human
2GS7_A     120 QYLLNWCVQIAKGMNYLED-RRLVHRDLAARNVLVKTpQHVKITDFGLAKLLG-AEEKEYHAEGGKVPIKWMALESILHR 197  human
3BBT_B     117 QLLLNWCVQIAKGMMYLEE-RRLVHRDLAARNVLVKSpNHVKITDFGLARLLE-GDEKEYNADGGKMPIKWMALECIHYR 194  human
3KEX_A     115 QLLLNWGVQIAKGMYYLEE-HGMVHRNLAARNVLLKSpSQVQVADFGVADLLP-PDDKQLLYSEAKTPIKWMALESIHFG 192  human
3PP0_A     119 QDLLNWCMQIAKGMSYLED-VRLVHRDLAARNVLVKSpNHVKITDFGLARLLD-IDETEYHADGGKVPIKWMALESILRR 196  human
6175066   1038 KALLNWSTQIAKGMSYLEE-KRLVHRDLAARNVLVQTpSLVKITDFGLAKLLS-SDSNEYKAAGGKMPIKWLALECIRNR 1115 fruit fly
BAE06395   226 QHLLNWSLQIAKGMKYLSEeKHLVHRDLAARNVLVKSpNHVRITDFGLAKLLD-VKEDVYRAEGGKMPIKWLALESIQHR 304  Ciona intestinalis
BAE06394   942 RQILSWCVQIAKGMKYLEE-KHLVHRDLAARNVLVKTpNHVKITDFGLAKMLD-TKEEIYHAEGGKLPIKWLAIECITER 1019 Ciona intestinalis
AAA29866  1159 LTLLSWAEQIADGMSYLEM-RGIIHRDLAARNVLVQTrEHVQITDFGLAKMLErRDEDSVIVKAGRVPIRWLAIETLQYG 1237 Schistosoma mansoni
BAA81724   942 YSMLNFSRQIADGMAYLEE-KRMVHRDLAARNVLVHTpQLVKITDFGLTRIID-VGESHYKATGGMVPLRWMAPESIFLF 1019 Ephydatia fluvia...
Feature 1                                                                                      
2GS6_A     198 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIdADSRPKFRELIIEFS 277  human
2GS7_A     198 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIdADSRPKFRELIIEFS 277  human
3BBT_B     195 KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIdADSRPKFKELAAEFS 274  human
3KEX_A     193 KYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIdENIRPTFKELANEFT 272  human
3PP0_A     197 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIdSECRPRFRELVSEFS 276  human
6175066   1116 VFTSKSDVWAFGVTIWELLTFGQRPHENIPAKDIPDLIEVGLKLEQPEICSLDIYCTLLSCWHLdAAMRPTFKQLTTVFA 1195 fruit fly
BAE06395   305 IFTQKSDVWSFGVTMWELMTFGKKPYESVPAREVHTLLERGERLPQPYICTIDIYMLLIKCWTVdAEARPTFKELTEELS 384  Ciona intestinalis
BAE06394  1020 EFSHLSDVWAFGVTCWELLTFGARPYEGVRAVDVLSLLERGDRLPQPATSTIDIYMVLVKCWMVdRLCRPSFSNLVDEFS 1099 Ciona intestinalis
AAA29866  1238 IYSHKTDVWSYGVTLWEIFTFGKRPYEDVDTVDIKDHVIKGGRLTQPDICTLDVYMVLVKCWMEdYESRPTFIELMRTFN 1317 Schistosoma mansoni
BAA81724  1020 EYTHKSDVWSFGVTIWEILTFGRLPYKGKNGKEVSQLVKNGQQLERPATCDANLYHLLEQCWLHdQTKRPSFSALSNSLN 1099 Ephydatia fluvia...
Feature 1                   
2GS6_A     278 KMARDPQRYLVIQ 290  human
2GS7_A     278 KMARDPQRYLVIQ 290  human
3BBT_B     275 RMARDPQRYLVIQ 287  human
3KEX_A     273 RMARDPPRYLVIK 285  human
3PP0_A     277 RMARDPQRFVVIQ 289  human
6175066   1196 EFARDPGRYLAIP 1208 fruit fly
BAE06395   385 KLARDPQRYLVID 397  Ciona intestinalis
BAE06394  1100 KMAADPSRFVVIK 1112 Ciona intestinalis
AAA29866  1318 TFCKTPGRYLYIE 1330 Schistosoma mansoni
BAA81724  1100 VMLNDPTRYIQTV 1112 Ephydatia fluviatilis

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