1YVJ,2B7A,3EYG,3NYX


Conserved Protein Domain Family
PTKc_Jak_rpt2

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cd05038: PTKc_Jak_rpt2 
Click on image for an interactive view with Cn3D
Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases
The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. They are PTKs, catalyzing the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jaks are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. The Jak subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270634
Aligned: 8 rows
Threshold Bit Score: 406.382
Created: 17-Jul-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:1YVJ; Human Jak3 tyr kinase binds an analog of the inhibitor, staurosporine; defined at 3.5A contacts.
  • Structure:2B7A; Human Jak2 binds a potent pan-Jak inhibitor; defined at 4A contacts.
  • Structure:3NYX; Human Tyk2 catalytic kinase domain binds Quinoline-Thiadiazole-Thiophene inhibitor; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  ###     #                 # #                               #       
1YVJ_A       4 FEERHLKYI-SQLGKGNFGSVELCRYDPlg-dNTGALVAVKQLQHSGpd---qQRDFQREIQILKALHSDFIVKYRGVSY 78   human
2B7A_B       5 FEERHLKFL-QQLGKGNFGSVEMCRYDPlq-dNTGEVVAVKKLQHSTee---hLRDFEREIEILKSLQHDNIVKYKGVCY 79   human
3EYG_A       6 FEKRFLKRI-RDLGEGHFGKVELCRYDPeg-dNTGEQVAVKSLKPESgg--nhIADLKKEIEILRNLYHENIVKYKGICT 81   human
3NYX_A      11 FHKRYLKKI-RDLGEGHFGKVSLYCYDPtn-dGTGEMVAVKALKADCgp--qhRSGWKQEIDILRTLYHEHIIKYKGCCE 86   human
BAA81718   541 VPFEQLKLS-KKLGSGHFSNVYAATWTNp--gKQTLEVAVKVPNVDGeeldavMNDLEREITTMHSLDHQYIVKLIGISD 617  Ephydatia fluvia...
Q24592     886 SECRVIYNMeNMIGRGHYGTVYKGHLEFndkdQPREQVAIKMLNTMQv-----STDFHREIGIMRTLSHPNIVKFKYWAE 960  fruit fly
BAE06524   852 YRDDNLTFV-KQLGEGHFGHVDLYHHDIqr-nGQFERVAIKSLRRSMnnp-qsRSDFRNEIETMRRIDHKYIVKLNGVAE 928  Ciona intestinalis
AAD50352   816 FEERHLRYI-SLLGKGNFGSVELCCYDPlg-dNTGELVAVKKLQPSKks---sMEDFKKEVKTLSVLHCEYIVKYKGVCY 890  Tetraodon fluvia...
Feature 1                      ####  ##                                                    ## #
1YVJ_A      79 gpg------rpELRLVMEYLpSGCLRDFLQRHra---------rLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 143  human
2B7A_B      80 sag------rrNLKLIMEYLpYGSLRDYLQKHke---------rIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 144  human
3EYG_A      82 edg------gnGIKLIMEFLpSGSLKEYLPKNkn---------kINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVL 146  human
3NYX_A      87 dqg------ekSLQLVMEYVpLGSLRDYLPRHs-----------IGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVL 149  human
BAA81718   618 aphfltslggrIPLVIMEYVsRGSLRSYLQELqdrshteprtaqNSRKTLLLFSEQIANGMDYLENQKLVHRDLAARNVL 697  Ephydatia fluvia...
Q24592     961 k----------SHCIIMEYLqSGSFDIYLRFTap---------nLNNPRLVSFALDIANGMKYLSDMGLIHRDLAARNIL 1021 fruit fly
BAE06524   929 p----------SLRIVMEYLpYGSLSHFLRGQrdsg----ialqQLSGLLLRFSFQIAQGMLYLQEKRVIHRDLALRNIL 994  Ciona intestinalis
AAD50352   891 smg------rlSMGLVTEYLpYGSLIGYLENNrh---------kVDTRRMLLFASQICKGMEYLQSLRFVHRDLAARNIL 955  Tetraodon fluvia...
Feature 1                   ##                                                                 
1YVJ_A     144 VESe----AHVKIADFGLAKLLPlDKDXXVVRePGQSPIFWYAPESLSDn---IFSRQSDVWSFGVVLYELFTYC----- 211  human
2B7A_B     145 VENe----NRVKIGDFGLTKVLPqDKEXXKVKePGESPIFWYAPESLTEs---KFSVASDVWSFGVVLYELFTYI----- 212  human
3EYG_A     147 VESe----HQVKIGDFGLTKAIEtDKEXXTVKdDRDSPVFWYAPECLMQs---KFYIASDVWSFGVTLHELLTYC----- 214  human
3NYX_A     150 LDNd----RLVKIGDFGLAKAVPeGHEYYRVReDGDSPVFWYAPECLKEy---KFYYASDVWSFGVTLYELLTHC----- 217  human
BAA81718   698 IESd----KLIKISDFGLSRVPT-KSDYYYSNnLKELPIFWYAPECLRTr---RFTSKGDVWSYGVTLWEMFTLGrlpth 769  Ephydatia fluvia...
Q24592    1022 VDHng-dgDCVKISDFGLAQFAN-SDGYYYAKsKRDIPIRWYSPEAISTc---RFSSYSDVWSYGVTLFEMFSRGe---- 1092 fruit fly
BAE06524   995 LDKegsncWNIKISDFGLSRILSeDRDYYTGN-PDEFPAQWYAPECLRLdgrrTFHFESDVWSYGVTLWEMFSYGa---- 1069 Ciona intestinalis
AAD50352   956 VASe----SLVKIADFGLTKIIPcNKEYYRVTqPGESPIFWYAPESINEs---RFSHESDVWSFGVVLYELFSYC----- 1023 Tetraodon fluvia...
Feature 1                                                                                      
1YVJ_A     212 ------DKSCSPSAEflrmmgc-erdvpaLCRLLELLE--EGQRLPAPPACP------AEVHELMKLCWAPsPQDRPSFS 276  human
2B7A_B     213 ------EKSKSPPAEfmrmigndkqgqmiVFHLIELLK--NNGRLPRPDGCP------DEIYMIMTECWNNnVNQRPSFR 278  human
3EYG_A     215 ------DSDSSPMALflkmigp-thgqmtVTRLVNTLK--EGKRLPCPPNCP------DEVYQLMRKCWEFqPSNRTSFQ 279  human
3NYX_A     218 ------DSSQSPPTKfleligi-aqgqmtVLRLTELLE--RGERLPRPDKCP------CEVYHLMKNCWETeASFRPTFE 282  human
BAA81718   770 vfqaqlRHFQHPPGQpav---------niHTQMVRLLTegPSPSLPPPPPLPkmspcsSDVYDIMVECWQVrPEDRPSFH 840  Ephydatia fluvia...
Q24592    1093 ------EPNLVPIQTs-------------QEDFLNRLQ--SGERLNRPASCP------DFIYDLMQLCWHAtPRSRPSFA 1145 fruit fly
BAE06524  1070 ------RPTYEPLPNitl---------rqLTQLQELLK--DNVRLSQPEHCP------NEVFHLISRCWEYePQQRVKFD 1126 Ciona intestinalis
AAD50352  1024 ------DINSNPKRLymqqighnvqtpsiSLHLANILK--SNWRLPAPPDCP------AKVYSLMKECWLYdFMERPCFS 1089 Tetraodon fluvia...
Feature 1                
1YVJ_A     277 ALGPQLDMLW 286  human
2B7A_B     279 DLALRVDQIR 288  human
3EYG_A     280 NLIEGFEALL 289  human
3NYX_A     283 NLIPILKTVH 292  human
BAA81718   841 DLQLKVALVA 850  Ephydatia fluviatilis
Q24592    1146 TIVDIITREV 1155 fruit fly
BAE06524  1127 ELCREFDRLR 1136 Ciona intestinalis
AAD50352  1090 FLGNQIEVIM 1099 Tetraodon fluviatilis

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