Conserved Protein Domain Family
PA2301

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cd04939: PA2301 
PA2301 is an uncharacterized Pseudomonas aeruginosa protein with a YbaK-like domain of unknown function. The YbaK-like domain family includes the INS amino acid-editing domain of the bacterial class II prolyl tRNA synthetase (ProRS), and it's trans-acting homologs, YbaK, and ProX. The primary function of INS is to hydrolyze mischarged cysteinyl-tRNA(Pro)'s, thus helping ensure the fidelity of translation. Organisms whose ProRS lacks the INS domain express a single-domain INS homolog such as YbaK, ProX, or PrdX which supplies the function of INS in trans.
Statistics
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PSSM-Id: 240137
Aligned: 16 rows
Threshold Bit Score: 201.034
Created: 3-May-2007
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative deacylase active site [active site]
Evidence:
  • Comment:A mutation of the conserved lysine to arginine in Haemophilus influenzae YbaK abolishes activity.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                     #                                                 
NP_250991    36 ELVVFRVADEHSDTAAFSARYGFG-LEDCANTLVLRYKRDGAEGYAAVVNLGSRRLDVNGAVKALLGARRLSFAAREVAT 114 Pseudomonas aeru...
YP_716519    32 RVEVAQIDPEVADTAAFCARYGVE-PADSANCVIVAARRGAETTLAACVVLATTRADVNGLVRRRLAARKVSFAPMDTAV 110 Frankia alni ACN14a
AAZ54629     35 RLRVAAIDPELADTANFCAAYGVP-LDASANCVIVAARRGGETRLAACVVLATTRADINGVVRRHLGARKASFAPQEEAV 113 Thermobifida fus...
YP_873598    36 CVTVAEIDPDAADTAEFCARYQVL-PEESANCVVIAGRRGGATTFAACVVLATTRADVNGVVRRHLGVRKASFAPMAEAV 114 Acidothermus cel...
CAC42858     40 QILYADTEPDWADTATFVEHYGRElLEQSANCVVVTGKRGGGTTLAACVVLSTTRVDVNGVVRRRLGARKASFAPMDTAT 119 Streptomyces coe...
NP_625597    40 QILYADTEPDWADTATFVEHYGRElLEQSANCVVVTGKRGGGTTLAACVVLSTTRVDVNGVVRRRLGARKASFAPMDTAT 119 Streptomyces coe...
NP_828218    40 RIVYVDTEPEWADTAVFLEHYGKDlLDRSANCVVVAGRRGGETVLAACVVLSATRVDVNGAVRRRLGARKASFAPMDTAT 119 Streptomyces ave...
YP_638884    33 GLWVSAIDPGLADTAEFCAQYGIA-PEHSANCVVVEAKRAERVWYAACLVLATTRADVNGVVRKWLDARKISFAPTETAV 111 Mycobacterium sp...
CAE37458     38 GLLVFAVDDAHSDTAQFSERYGFG-LQDCANTLVLRYRKDGGEHYAAVVALGDRRLDVNGAAKARLGAQRLSFARREDAT 116 Bordetella parap...
ZP_00996959  41 AAEVAPIDATLADTEVFCAAYDVA-LEASANCVIVAGKRAGETTYAAVMILATDRADINGVVRKHLGVRKISFAPHDDAV 119 Janibacter sp. H...
Feature 1              ##                          #                        
NP_250991   115 ELTGMQFGGITAFGLPEGMPLLVDAAVFErPLVVMGAGVRETKLLLSPALLKDLPGVVVA 174 Pseudomonas aeruginosa PAO1
YP_716519   111 SRTGMEHGGITPVGLPADWPLLIDRAVAEhPRVVVGSGLRRSKLWLPGAALAALPAAEVL 170 Frankia alni ACN14a
AAZ54629    114 QQTGMEYGGITPVGLPPEWPILIDSAVVAqPEVVVGSGLRRSKLILPGAALAELPGAEVL 173 Thermobifida fusca YX
YP_873598   115 ERTGMEYGGITPIGLPGEWPILIDPAVLS-RDVVIGSGLRRSKLVVPGELLTRLPNAVVL 173 Acidothermus cellulolyticus 11B
CAC42858    120 GETGMEYGGITPVGLPAGWPVLVDSAVVDlPYVLVGSGRRRGKLLVPGKAFAELPGAEVL 179 Streptomyces coelicolor A3(2)
NP_625597   120 GETGMEYGGITPVGLPAGWPVLVDSAVVDlPYVLVGSGRRRGKLLVPGKAFAELPGAEVL 179 Streptomyces coelicolor A3(2)
NP_828218   120 GETGMEYGGITPIGLPGGWPVLVDSAVVDlPYVLVGSGRRRGKLLVPGKAFAELPNAVVL 179 Streptomyces avermitilis MA-4680
YP_638884   112 SLTGMEYGGITPLGLPDDWPILIDEQVLAqPHVVIGSGVRASKILAEPDRLTSLPRAEVL 171 Mycobacterium sp. MCS
CAE37458    117 ALTGMEFGGITAFGLPAGWPILVDEAVMRrPHVVMGAGVRTAKLLLAPAQLRALPGVDVA 176 Bordetella parapertussis
ZP_00996959 120 SLTGMEFGGITPIGLPAGWPILVDAAVVGaGAVVIGSGVRGSKLLVDGAALAQLPTAEVL 179 Janibacter sp. HTCC2649

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