Conserved Protein Domain Family
PA_subtilisin_1

?
cd04818: PA_subtilisin_1 
PA_subtilisin_1: Protease-associated domain containing subtilisin-like proteases, subgroup 1. A subgroup of PA domain-containing subtilisin-like proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following subtilisin-like proteases: i) melon cucumisin, ii) Arabidopsis thaliana Ara12, iii) Alnus glutinosa ag12, iv) members of the tomato P69 family, and v) tomato LeSBT2. However, these proteins belong to other subtilisin-like subgroups. Relatively little is known about proteins in this subgroup.
Statistics
?
PSSM-Id: 240122
Aligned: 31 rows
Threshold Bit Score: 75.0578
Created: 25-Jan-2007
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
PA/protease or
Feature 1:PA/protease or protease-like domain interface [polypeptide binding site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
ZP_01542452  508 GFAGFGPDVfev-sgDLVRl-----VDATDPVNDGCEAAtnaaELAGKIAIIDRGACNFTQKVKNAQDAGSIAVIIANNr 581  Shewanella woo...
ZP_01423983  431 AAASFGGPInalvsnNYLPa-----SVISPTNALGCSPFap-tTFTGKIALIQRGTCEFGVKALNAQNGGASFVIIYNNa 504  Herpetosiphon ...
NP_717522    472 FTAGSGPALtevlsgIPVYa-----GSLDSTNFEACKAFat-dAFKGKIAVIKRGGCTFDVKVAAALNAGAKGVVVFNRe 545  Shewanella one...
YP_869329    470 FTPGSGPVQt-----DVVKglpvfaGAVDATNVEGCKVFpa-dAFKDKIAVIKRGSCDFATKVSGALTAGAKAVIVYNRd 543  Shewanella sp....
ZP_01539856  462 KSYDFTPGSgpv-qtEVISaeplyaGSLDATNVQGCNAFae-kAFENKIALIKRGSCNFSDKVNNAIAADAKAVIVFNKd 539  Shewanella woo...
NP_719336    366 VGAGFNKSNaysftnTVAP------IVYPAANKNGCTAYt--eDLTGKTVLIDRGTCGFVVKVLNAQLKGASFVIVANNa 437  Shewanella one...
ZP_01612553  379 QASGFGPQD------GFTLsgadidLVYPTANQNGCDAFaddvDFTGKAVLIDRGACAFTQKVLNAQAKGAEFVFIANNv 452  Alteromonadale...
ZP_01465127  547 GSAAWGKLAy-----DLTGel---vIPNPSGITEGCEPFpa-nAFSGKIVLLDRGTCNYTVKALNAQNAGAIAILVANNv 617  Stigmatella au...
YP_633597    506 GDSRFGAQEyt--ldGPVQ------VLAPTGRTLGCTPFea-gTFAGHVALLDRGACDFVTKALNAQDAGAIAVLVANTn 576  Myxococcus xan...
ZP_01135835  366 GTAAFGAEGp----fEFSNld--aeLIYPTENQEGCDPFsadtDFTGKAVMIDRGTCNFSDKAFYAQSKGAVFVIIANNr 439  Pseudoalteromo...
Feature 1              ###                                       
ZP_01542452  582 dg-daTITMGGsd--dtITIPSMMVSQNEGAAIYALlda-deTVTVDM 625  Shewanella woodyi ATCC 51908
ZP_01423983  505 angntLINMGAgavgaqVTIPAIMIGFNQGTGLVNWyaq-hgAASVAE 551  Herpetosiphon aurantiacus ATCC 23779
NP_717522    546 gegntRLSMSGle---kFNIPAVFIGNTDGLALIDAita-npSLELVI 589  Shewanella oneidensis MR-1
YP_869329    544 gegnaRLTMSAle---kLNVPAVFIGNTDGVALLEAmaa-npAVELTL 587  Shewanella sp. ANA-3
ZP_01539856  540 geanaRLTMSSle---kTTIPAVFIGNLDGLEMVAAlae-npKLEVTI 583  Shewanella woodyi ATCC 51908
NP_719336    438 an-agAFVMGGtd--dkITIPSVMVSKEDGDAIKTAla--sgDVAFSI 480  Shewanella oneidensis MR-1
ZP_01612553  453 dd-gtPAPMGGfd--adVTIKNVGINFAAGAALKAQlea-ggPATFDI 496  Alteromonadales bacterium TW-7
ZP_01465127  618 ta-aaALSLGGad--paVTIAAAGLTQATGIALKNEvkthnsTIAVKM 662  Stigmatella aurantiaca DW4/3-1
YP_633597    577 ag-egPLSMSGdd--arVTVPVASISRETADLWKAEvaanasTVQVRL 621  Myxococcus xanthus DK 1622
ZP_01135835  440 eg-aaPGMSAGpkg-pdVTIRTVSVTQTDANNLKAQlna-geTATFSF 484  Pseudoalteromonas tunicata D2

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap