2B4G,2DOR


Conserved Protein Domain Family
DHOD_1A_like

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cd04741: DHOD_1A_like 
Click on image for an interactive view with Cn3D
Dihydroorotate dehydrogenase (DHOD) class 1A FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively.
Statistics
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PSSM-Id: 240092
Aligned: 11 rows
Threshold Bit Score: 297.699
Created: 26-Dec-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:2DOR; Lactococcus lactis DHODA binds FMN and orotate

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                       #                        ##                                      
2B4G_D         9 VNILGHEFSNPFMNAAGVlCTTEEDLRRMTes-esGSLIGKSCTLAPRTGNPEPRYFGl--------------------- 66  Trypanosoma brucei
2DOR_A         4 TTFANAKFANPFMNASGVhCMTIEDLEELKas-qaGAYITKSSTLEKREGNPLPRYVDl--------------------- 61  Lactococcus lactis
CAD71046      19 MTIPKLNIHPPLINTPCPaATTLEDLLILWncpstGAITTRTSLLSGFPHDDTKNLYVfydssshtvssst--npsppss 96  Neurospora crassa
AAQ61213      11 VTWLGQTMPGCLYNASGVwCREEDELEVLLas-daAAVISKSATLAPRDGNPEPRYCRt--------------------- 68  Chromobacterium...
XP_367338      9 RRPPPLQIYPPLVNSATPwATTLKDLNRLYscphtGAVTTRTSLIHGFPHDPEVHQHAlydtvavs-----------gal 77  Magnaporthe gri...
EAA71469       1 MRPPQLIISPPLLNSATPwATDLDDLLAIAsspstGAITTRTSLINGFNHQHEQHQYLffdpssatpsqgtssdqtrpkd 80  Gibberella zeae...
CAE52171       7 TKFLNNTYENPFMNASGVhCMTTQELDELAns-kaGAFITKSATTLEREGNPKPRYISv--------------------- 64  baker's yeast
BAD29726     338 VSVLGHTFANPLMNAAGVcCSTTEELDSLLas-asGTLITKSCTAQQRDGNPAPRFKPl--------------------- 395 Bodo saliens
ZP_00571524    4 VTLAGVALEHPIMNAAGT-CKTVEDVTALArg-avAAVVVGSITRDARTGNGGEVYWSg--------------------- 60  Frankia sp. EAN...
EAT85606      15 YKMKALTISPPLLNSSNPwCTSLAQLQELYdcphtGAVTTRTSLLKGFPHNSSVHQFAffnprslsase-----tsqdkg 89  Phaeosphaeria n...
XP_001224691   3 APPPLFNIHPPLINTACPwATTIDDLRLLYkcpstGAVTTRTSLINGFDHDPERHHYAffdaaq---------------- 66  Chaetomium glob...
Feature 1                 # ###                                                                  
2B4G_D        67 ----pLGSINSMGLPNLgvDFYLSYAAQthdy-----------------srkpLFLSMSGlsvEESVEMVKKLvpitk-- 123 Trypanosoma brucei
2DOR_A        62 ----eLGSINSMGLPNLgfDYYLDYVLKnqken---------------aqegpIFFSIAGmsaAENIAMLKKIqesd--- 119 Lactococcus lactis
CAD71046      97 atptqNATLNSLGYSPLplQTYLDFIRTiavyhsppppppnnhkgrsigrsktIIISVTGs-aEDVAQCYLHIarlqsef 175 Neurospora crassa
AAQ61213      69 ----aMGSINSMGLPNRgfDYYLDYARRyryg-----------------sgkpLFLSLSGlslDDNCAMLRRLaeeg--- 124 Chromobacterium...
XP_367338     78 prgtsNASFNSLGYSPIllSEYLSFIETissqqel------------gsrsktFIVSVTGt-pQEIAACYGMVsatqak- 143 Magnaporthe gri...
EAA71469      81 hkaeaTSSLNNLGYSPIplDGYLNFLTEisgrlp--------------hlkktFVISVTGs-pEDIQESYKRIesaskd- 144 Gibberella zeae...
CAE52171      65 ----pLGSINSMGLPNEgiDYYLSYVLNrqkny---------------pdapaIFFSVAGmsiDENLNLLRKIqdse--- 122 baker's yeast
BAD29726     396 ----pLGSINSMGLPNEgyEYYAEYVSHrakgg---------------aaakpIFFSISGmtmQDSADMAAKLaahpq-- 454 Bodo saliens
ZP_00571524   61 ----gSYSLNALGLPNRgiGYYAEQLPAmadiah--------------gygkpLVVSVAGf-aAEEYATLARVaadt--- 118 Frankia sp. EAN...
EAT85606      90 gtsdqSGSLNTLGYSPTsiREYLEYIRTisdglkdl---------ndgehrkpFIISVTGs-eEDVVECYKLIsahqkh- 158 Phaeosphaeria n...
XP_001224691  67 agsapNASINSLGYSPLtlPIYLGFIQTisdeqp-------------swsakgFILSVTGs-vEDIAVSYQHIasaarg- 131 Chaetomium glob...
Feature 1                           #  # #                                                    #  
2B4G_D       124 -----------ekgtILELNLSCPNv--pGKPQVGYDFd--TTRTYLQKVSeay-----------------glPFGVKMP 171 Trypanosoma brucei
2DOR_A       120 ------------fsgITELNLSCPNv--pGKPQLAYDFe--ATEKLLKEVFtff-----------------tkPLGVKLP 166 Lactococcus lactis
CAD71046     176 lyvtsssspsfvvkvAMEINLSCPNi--pHHPPPAYSRd--ALVRYLEELKkaikaae--------aeglpriPVGLKTP 243 Neurospora crassa
AAQ61213     125 ------------lpaVPEINLSCPNv--pGKPQLGYDFa--ATAEALGAFDaay-----------------sgLYGVKLP 171 Chromobacterium...
XP_367338    144 ----------vktplALELNLSCPNi--sGKPPPAYDGp--SLLEYITWLSdlgpt-------------gpviPVGIKTP 196 Magnaporthe gri...
EAA71469     145 ----------lpfplAMEVNLSCPNi--pGAPPPAYDGp--SLQKYLTLLPshp-----------------slPIGIKTP 193 Gibberella zeae...
CAE52171     123 ------------fngITELNLSCPNv--pGKPQVAYDFd--LTKETLEKVFaff-----------------kkPLGVKLP 169 baker's yeast
BAD29726     455 -----------ganvLLELNLSCPNv--pGKPQIGYDMq--DMRRYLEAVTavy-----------------prPFGVKLP 502 Bodo saliens
ZP_00571524  119 ------------gadLIELNLGCPNvwdgGSQKRIACFdlgQTDAICAQVEaalaggra------gpghrrapAYGVKVS 180 Frankia sp. EAN...
EAT85606     159 ----------vqmalAMEVNLSCPNi--vGKPPPAYSSt--SLLSYLTALKgeigkqlkplqqshphgghvhvPIGIKTP 224 Phaeosphaeria n...
XP_001224691 132 ----------vqfplAMEINLSCPNi--pDMPPPAYSGe--ALTMYLSRIQqvvvetany-----ddgntpriPVGLKIP 192 Chaetomium glob...
Feature 1                                                      ###                               
2B4G_D       172 PYFDiAHFDMAAAVLNdfp--------------------lvKFITCVNSIGNGLVIDPa-------------NETVVIKp 218 Trypanosoma brucei
2DOR_A       167 PYFDlVHFDIMAEILNqf---------------------plTYVNSVNSIGNGLFIDPe-------------AESVVIKp 212 Lactococcus lactis
CAD71046     244 PYTYeTQFLGLMEALEasasatalasernkkqeekelqcpiTFLTATNTLGSCLAFTAftgf-------tddFTQAALPt 316 Neurospora crassa
AAQ61213     172 PYFDpAHFAAMAEILNrhp--------------------rlAFVTCINSIGNGLVVDId-------------SEAVVIKp 218 Chromobacterium...
XP_367338    197 PYTHsTQYETLISALIagspt---------------glcpiSFITSTNTLGSCLMLTSldghk----gqgqqPHKNVLPg 257 Magnaporthe gri...
EAA71469     194 PYTHhGQFATLIETLQqaa-------------------ssiSFITATNTLGSCLILQDne----------niHMSPQLPg 244 Gibberella zeae...
CAE52171     170 PYFDfAHFDIMAKILNef---------------------plAYVNSINSIGNGLFIDVe-------------KESVVVKp 215 baker's yeast
BAD29726     503 PYFDmAHFDQAAEVLNafp--------------------svAFLTCINSVGNGLVIDDt-------------CDTVAIKp 549 Bodo saliens
ZP_00571524  181 PFSDpEALADLAALLGrrsea----------------dggpRFVTAVNTFPNALVLDD--------------RRRPVLDv 230 Frankia sp. EAN...
EAT85606     225 PYTYhDQFQAMIDALLesakaep-----------khlpcpvSFITATNTLGSSLLLTPqvpaeg---dpaqsTFEATIKs 290 Phaeosphaeria n...
XP_001224691 193 PYTHsTQYHTLIAALEaatlsg--------------ghcpiSFITTTNTLGSCLLLDPspapappdpsshypGSTTALPg 258 Chaetomium glob...
Feature 1                  #                                         #                    ##     
2B4G_D       219 k--qGFGGLGGKYVLPTALANVNAFFRRcp--------------dKLVFGCGGVysGEEAFLHILAGASMVQVGTALHDe 282 Trypanosoma brucei
2DOR_A       213 k--dGFGGIGGAYIKPTALANVRAFYTRlk-------------peIQIIGTGGIetGQDAFEHLLCGATMLQIGTALHKe 277 Lactococcus lactis
CAD71046     317 d--lGTGGLAGAPLHPLALGNVKTLRKMlderek------tlghrIQIIGVGGVldAQGYKRMRMAGADVVGLASGLLLr 388 Neurospora crassa
AAQ61213     219 k--dGLGGLGGDYVLPTALANVREFYRLlp--------------gKDVVGCGGVksGREAFMHILAGARAVQVGTCLYHe 282 Chromobacterium...
XP_367338    258 ---nGLGGMAGTPLHPLSLGNVATIRRLldeqp-------dmlghIQIVGVGGVcdSGGYRRMRSVGAAVVGVGTGLGIk 327 Magnaporthe gri...
EAA71469     245 ---tGVGGMAGPSLHPLALGNVSTLRKMlnqvp--------elshVQIIGVGGVrdGDGYRRMRTVGACAVAVGTGLGKq 313 Gibberella zeae...
CAE52171     216 k--nGFGGIGGEYVKPTALANVRAFYTRlr-------------peIKVIGTGGIksGKDAFEHLLCGASMLQIGTELQKe 280 baker's yeast
BAD29726     550 k--nGFGGIGGEYVLPTALANVNAFRTRcp--------------eKVIIGCGGVlcGRDAYQHLLAGASLVQVGTQLWKe 613 Bodo saliens
ZP_00571524  231 ----ALAGLSGAALKPVGLGQVRQLRALlp-------------eqVDVVGVGGVlgGRDVADYLAAGARAVQGATAFWNr 293 Frankia sp. EAN...
EAT85606     291 anetGIGGLAGTPLHPLALGNVYTIRGMlfqhd--------tlsgIQIIGVGGVedVHGFDRMRAVGAAAVGVGTALGRk 362 Phaeosphaeria n...
XP_001224691 259 ---tGIGGMAGAALHPLALGNVATLRRLldkrwpdeaaggvnkgrVRLVGVGGVsdAAGYLRMRAAGADVVGLATGLGLk 335 Chaetomium glob...
Feature 1                          
2B4G_D       283 --GPIIFARLNKELQEIM 298 Trypanosoma brucei
2DOR_A       278 --GPAIFDRIIKELEEIM 293 Lactococcus lactis
CAD71046     389 --GVKVFEEIEKGVGGDW 404 Neurospora crassa
AAQ61213     283 --GPGAFARIAGELAALM 298 Chromobacterium violaceum ATCC 12472
XP_367338    328 --GVKVFEDIAMDVHDNW 343 Magnaporthe grisea 70-15
EAA71469     314 --GPAVFKRIEADLKGKW 329 Gibberella zeae PH-1
CAE52171     281 --GVKIFERIEKELKDIM 296 baker's yeast
BAD29726     614 --GPDAFRRIRDELQAHL 629 Bodo saliens
ZP_00571524  294 geDPTVFGDILSDWIDAG 311 Frankia sp. EAN1pec
EAT85606     363 --GVDIFAEIAKGPESKS 378 Phaeosphaeria nodorum SN15
XP_001224691 336 --GVGVFAEVEGGLERGW 351 Chaetomium globosum CBS 148.51

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