Conserved Protein Domain Family
BAH_plant_1

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cd04721: BAH_plant_1 
BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.
Statistics
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PSSM-Id: 240072
Aligned: 6 rows
Threshold Bit Score: 201.903
Created: 19-Sep-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
BAF23774  108 FCRKGITISVHNFVYILSEE--KKRLIAQVEDLYEDTNSTNVVMVRWFDKVDEVGVELPPd---vGDREIFFSPGLQDLS 182  Japanese rice
ABB47564  285 FWRRGFTFMVHDFVYILVQH--GNKLVAYVEELYEDNHANNMVHIRWFRTLNSAGIQLSPs---vNDIEILLSDNLQDIG 359  Japanese rice
NP_177025 144 YLRNGVRISVNDFVYVLAEQ--HKRLVAYIEDLYEDSKGKKMVVVRWFHKTEEVGSVLSDd---dNDREIFFSLNRQDIS 218  thale cress
BAD32028  158 FCRNGTTISTHSFVLVMSEE--ESRYLAYLEDMYEDKKGQKKVKVRWFHQNQEFACAIPPpp--pHPCEVFITPYSQVIS 233  Japanese rice
BAB09227   80 FCRNGTTIGVQSFVFVLSKG--EDRYVAYLEDMYEDKRGLKKVKVRWFHYTKEVKGAVALkn--pNPKEVFITPHSQVIS 155  thale cress
CAL52274  261 FTRDGVEFKNGDSVYCLPERatEDMYLAQIQRCFEDEDKSMMIECCWYMTQDEVLAWGGEispktSPDEIFLGTSVDVNP 340  Ostreococcus tauri
BAF23774  183 VECIDGLAAVLSAQHFEKFQSspkh------sywqPYICRRQIDEd-------------GVKPFDVTQLQGY 235  Japanese rice
ABB47564  360 VECIDGLASVLNEEHFEKFQAiann------tnrqPYLCIRHIDNn------------sNVKTFDIAQLQGY 413  Japanese rice
NP_177025 219 IECIDYLATVLSPQHYEKFLKvpmh------vqtvAFFCQKLYGDd-------------GLKPYDITQLEGY 271  thale cress
BAD32028  234 VECVDDIATVLTPEHYEKCVNtlpns-----smvgIRFCFRQYSKn-------------KFKRFDLRSLRGY 287  Japanese rice
BAB09227  156 AECVDGPATVLTREHYEECVAsfpns-----llarVHMCYRQLRNs-------------KVKPFDLSKLRGY 209  thale cress
CAL52274  341 ISALEGLAPVRTRERYEKTASvrkkvtdpaerelfAARCYVPVHGynpksknaaqrkagTFYPLDHVPGRGF 412  Ostreococcus tauri
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