Conserved Protein Domain Family
BAH_plant_3
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cd04713: BAH_plant_3 
BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.
Links
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Statistics
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PSSM-Id: 240064
Aligned: 6 rows
Threshold Bit Score: 232.741
Created: 19-Sep-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3021264        39 TGKGEKKKCHYKTFQFHANKYGLEDSVLLVPEDg-EKPYVAIIKDIYTQRkeGHVKLEVQWLYRPEEVEKKYVGNWKSKg 117  thale cress
BAF05142      147 TGRGKKQRKHYTSFEYEGNTFELEDPVLLTPEDskEKPYVAILKDITETE--GSLSVTGQWFYRPEEADKKGGGSWKASd 224  Japanese rice
CAB88127       64 TGKGQNKKCHYETFEFHGKQYRLKDFVLLYPEDnkQKEYIAIIKDIYSQEkdGLVKMEVQWFYRREDIEEKHFGKWKTEn 143  thale cress
NP_192893     111 TGKGKGKRTHFNQFAYDGNTYDLEVPVLLVPEDksQKPYVAIIKDITQTKd-GSMMILGQWFYRPEEAEKRGGGNWQSSd 189  thale cress
CAB41134       31 GGSSCLSLSSSTSFSKDGRKISVGDCALFKPPQd-CPPFIGIIRLIIAEEe-DKLKLGVNWLYRPTELKLGKGILLEAE- 107  thale cress
NP_001048086   71 ERVDSPRPASSDSFLKDGREFRVGDCALFQAVE--VPPFIGLIRWIEKKEe-GFPKLRVSWLYRPADIKLNKGTQLCAA- 146  Japanese rice

3021264       118 SRDLFYSFHRDEVFAESVKDDCIVHFVQenkqipnRRKHPGFIVQHVYDNVKKKLRKLTFNGFDLQQK 185  thale cress
BAF05142      225 TRELFYSFHIDDVPAESVMHKCVVHFIPqhkkipsRKEHPGFIVQKVYDTVAKKLWNLTDKDYEDNKQ 292  Japanese rice
CAB88127      144 PREIFFSFHCDEVFAESVKYKCLVYFVPddkqipnRIHHSGFIVQMVYDNVRKKVRKFSHEGFEEEQK 211  thale cress
NP_192893     190 TRELFYSFHRDEVPAESVMHRCVVYFVPahkqlpkRKNNPGFIVRKVYDTVEKKLWKLTDKDYEDSKQ 257  thale cress
CAB41134      108 PNELFYSFHEDNIPAASLLHPCKVAFLPrgv--elPSGISSFVCRRVYDVTNERLWWLTDQDYIDDRQ 173  thale cress
NP_001048086  147 PNEIFYSFHQDETSAVSLLHPCKVAFLRkgv--elPAGISSFVCRRVYDIDNKCLWWLTDQDYINERQ 212  Japanese rice
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