Conserved Protein Domain Family
BAH_Dnmt1_II

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cd04711: BAH_Dnmt1_II 
BAH, or Bromo Adjacent Homology domain, second copy present in DNA (Cytosine-5)-methyltransferases from Bilateria, Dnmt1 and similar proteins. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the genome. These effects include transcriptional repression via inhibition of transcription factor binding, the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting, and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.
Statistics
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PSSM-Id: 240062
Aligned: 7 rows
Threshold Bit Score: 233.928
Created: 18-Sep-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAG12188      605 DEELYPEYYRKSSDYIKGSNLDAPDPFRIGRIKEIFCpkrsngkpdtsEVKLRLYKFYRPENTHKGvkatyhaDINQLYW 684  Tetraodon nig...
AAH72774      839 DEDLYPEYYRKSSDYIKGSNLDAPEPYRLGRIKEIFCnkrsngkpneaDIKLRIYKFYRPENTHKGmkasyhsDINMVYW 918  African clawe...
AAF23609      629 DEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCpkksngrpnetDIKIRVNKFYRPENTHKStpasyhaDINLLYW 708  human
BAA07867      876 DEDLYPEHYRKYSEYIKGSNLDAPDPYRVGRIKEIFChirtngkpneaDIKLRIWKFYRPENTHKSmkatyhaDINLLYW 955  chicken
NP_571264     846 DEDLYPEYYRKSSDYIKGSNLDAPQPFRIGRIKEIFCnkrsngkpdttEIKLRLYKFYRPENTHKGpkgayhsDINQLYW 925  zebrafish
XP_001122269  776 DEDMYPEYYRKSSDHVKGSNYDTPEPFHIGYINSIYAttnnk-lvassDIWIKINKMYRPENTHKGltlmqqvDLNMVYW 854  honey bee
NP_001036980  771 DETIYPEYYRKNDSNTRGSNIDTGEPFCVGYIAAVTAasegp-lvvpqDIYLKVNVLLRPENTSSKfpq--heDTNVLYW 847  domestic silk...
CAG12188      685 SDEEVTVDMAQVLGRCQVEYGEDLnepvq--eyssGGPDRFYFLEAYNAKTKSFEDPPN 741  Tetraodon nigroviridis
AAH72774      919 SDEEAVVEFKAVQGHCTVEYGEDLtesiq--eysaGGSDRFYFLEAYNAKTKSFEDPPN 975  African clawed frog
AAF23609      709 SDEEAVVDFKAVQGRCTVEYGEDLpecvq--vysmGGPNRFYFLEAYNAKSKSFEDPPN 765  human
BAA07867      956 SDEETTVDFCAVQGRCTVVYGEDLtesiq--dysaGGLDRFYFLEAYNAKTKSFEDPPN 1012 chicken
NP_571264     926 SDEEATVSMTEVLTRCRVEYAEDLvesvq--dysnKGPDRFYFLEAYNAKTKSFEDPPN 982  zebrafish
XP_001122269  855 SDEVCDIKFSDVAGKCYLVYSENLdqsve--ewttAGPYRFYFSQAYNASEKTFVDPPY 911  honey bee
NP_001036980  848 TTEIREIPFSTVVGHCHLIYEQNVpqnislqewlgNDPCRFYFRMAYCKSTGEFTDLPQ 906  domestic silkworm
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