Conserved Protein Domain Family
CBS_pair_bac

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cd04630: CBS_pair_bac 
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria
The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Statistics
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PSSM-Id: 341393
Aligned: 23 rows
Threshold Bit Score: 163.923
Created: 29-Nov-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:CBS repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #########   #########     ######     ######  ######            #####       
YP_064086   9 ARDVMRKQVPTIDGmATARDAANMMKehqvSSLIVNKrd-enDAYGLISiQDLITEVMIpAREADMVNVYELMTKPIISV 87  Desulfotalea psych...
AAN03568    4 AADIMNPNVVTIKGlATIASATQCMRvn-kTRVLIVDrrhvhDAYGILTaTDIVSKVIAyGRDPRAIRVYEIMTKPCIFV 82  Synechococcus sp. ...
AEV15940    4 AKDIMSTQVVMIQGaATVKEAINLMKetglRALIVDRrh-eeDAYGIVTeTDIVYKVIAyGKDPATVQIHEIMTKPVIAV 82  Thermus sp. CCB_US...
KHD07507    9 VRDVMKTEFDRVDGiITVAQALRNMKhpevRSIIVNKrh-pdDEFGMVLlSDIARHVLAkDRSPERVNVYEIMAKPLLSV 87  Candidatus Thiomar...
EXI80557    9 VRDIMKTKFDMVDGiSTVADAINQMShvetKCLVVRKrn-enDEYGLVMlSDIAREVLAkDKSPSRTNIYEIMSKPVITV 87  Candidatus Accumul...
BAB72722    4 ASDVMTKDVATIRSsATVAEAVKLMRardwRALIVDRrh-eqDAYGIISeSDIVYKVIAyGKDPNKIRVYEVMSKPCIAI 82  Nostoc sp. PCC 7120
EGU46375    9 VRDVMTNNYVVIDGlTTVKEGIQLARshevKALVVNKrn-edDEYGLVLmNDIAKKVLAqNRSPDRTNIYEIMTKPALSV 87  Vibrio tubiashii A...
EDM64984    8 ASAVMTKNYICMDGmQTIREAIDAMKksdsKVIIVNKrd-qhDAYGILVlSDIAKQVLAkDRSPDRVNIYEVMAKPIVSV 86  Moritella sp. PE36
EON75288    9 AKEIMDTNVVMVDGmATAAEAVRLLKerkvDALIVEKrh-efDAYGIVVmQDLLEAVIIaGRNPAEVNLFEIMSKPLITV 87  Cyclobacteriaceae ...
ACR11119    8 CRDVMNQRFAIVDGlTTVSDALRIMNsnnyKKVIVKKrd-ehDEWGQVQlSDIAKHVIAkDRSPDRVNCYEIMAKPVISV 86  Teredinibacter tur...
Feature 1                                              
YP_064086  88 SADMDIRYVIRLLHrvNMRRAPVEEngHLVGMVTLTSLVLD 128 Desulfotalea psychrophila LSv54
AAN03568   83 SPDLAVEYVARLFSqwNLHSAPVMTd-KLLGIITVEDLISK 122 Synechococcus sp. PCC 7002
AEV15940   83 NPDLGVEYVARLFAntGIRRAPVIQg-EVIGIVSVTDILHK 122 Thermus sp. CCB_US3_UF1
KHD07507   88 SPQMDIRYCARLLDrfNLLRAPVMEndDVIGILGFTDIVLR 128 Candidatus Thiomargarita nelsonii
EXI80557   88 DPDMDIRYCARLFArfHLSRAPVVDngNIVGIVSFTDMILK 128 Candidatus Accumulibacter sp. BA-92
BAB72722   83 NPDLGLEYVARLFAdyGLHRAPVIQg-DLRGIISLTDILAQ 122 Nostoc sp. PCC 7120
EGU46375   88 DPDMNVKYCARLFErfGISRAPVIEagKIIGMVSYNNIVIN 128 Vibrio tubiashii ATCC 19109
EDM64984   87 PPEMDIRYCARLFErfGLFYAPVIEneDILGLIGYSELVLH 127 Moritella sp. PE36
EON75288   88 SSTLDIKYVAKLMVdvGIKQVPVEEggKYLGIISIRSLVLN 128 Cyclobacteriaceae bacterium AK24
ACR11119   87 RPGMDIKYCARLFNsfGLSSAPVIDneEVIGVVSYNDIVLS 127 Teredinibacter turnerae T7901

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