1ZFJ,4DQW,1JR1,1JCN,3TSB,4FXS,3USB,4Z87,5MCP


Conserved Protein Domain Family
CBS_pair_IMPDH

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cd04601: CBS_pair_IMPDH 
Click on image for an interactive view with Cn3D
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein
This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein. IMPDH is an essential enzyme that catalyzes the first step unique to GTP synthesis, playing a key role in the regulation of cell proliferation and differentiation. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Statistics
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PSSM-Id: 341376
Aligned: 167 rows
Threshold Bit Score: 70.1348
Created: 25-Sep-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 41 residues -Click on image for an interactive view with Cn3D
Feature 1:CBS repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #########   #########     ######      ######  ######      #####                 
1ZFJ_A     97 IIDPFFLTPeHKVSEAEELXQryrISGVPIVEtla-nrKLVGIITNRDXRFISDYnapISEHXTSEh-LVTAAvGTDLET 174 Streptococcus pyog...
4DQW_A    114 VRDPVTVTPsTKIIELLQMAReygFSGFPVVEq----gELVGIVTGRDLRVKPNAgdtVAAIMTPKdkLVTAReGTPLEE 189 Pseudomonas aerugi...
EFJ53014   99 IVTPAVASPsDTVNKLYELKNtrgFSSVCVTDtgalhgKLLGVVTTRDIDFINDRltpLSEIMTTD--LITAPeGITPED 176 Volvox carteri f. ...
P50098    111 IMKPKSVSPdVPVSTIRNIKSekgISGILVTEggkydgKLLGIVCTKDIDFVKDAsapVSQYMTRRenMTVERyPIKLEE 190 Trypanosoma brucei...
P39567    122 INNPIVISPtTTVGEAKSMKEkygFAGFPVTAdgkrnaKLVGAITSRDIQFVEDNsllVQDVMTKNp-VTGAQ-GITLSE 199 Saccharomyces cere...
CBN74980  119 ISNPAVMSPtCTVADLDDLKAernISGVPITEdgsigsKLVGLCTKRDLDLVDERhepLSEHMTPVddLILGReGCSLEE 198 Ectocarpus silicul...
ABO94702  104 VANPAVLRPsATLRDLDELRAargFSSVCISEsgtcgsALLGLVTTRDAELVRDRntlLSEVMTSVddLVLGStEKSAQE 183 Ostreococcus lucim...
Q7SFX7    127 ILDPVVITRdTTVGEAKALKEkwgFGGFPVTEsgnlgsKLVGIVTNRDIQFETDLdkpVSEVMVTD--LITATaGVNLLE 204 Neurospora crassa ...
EFN52824  152 VVHPVCMAPtSTVAELYDLKErkgFTSVCVTDtgkvggKLLGIVTTRDWDFVADLhtpLGEVMTKDv-EAAEYdTITAEK 230 Chlorella variabilis
EKD28385  101 ITEPVCVSPnDLISDVDKLKKtvnFSTFPVTEngkpfsKLLGLITKRDIDLESDRsipIKDVMTKN--LVTVKeGATLPE 178 uncultured bacterium
Feature 1                                         
1ZFJ_A    175 AERILHeHRIEKLPLVDnsgRLSGLIT---IKDIEK 207 Streptococcus pyogenes
4DQW_A    190 MKAKLYeNRIEKMLVVDenfYLRGLVT---FRDIEK 222 Pseudomonas aeruginosa PAO1
EFJ53014  177 AAAVLKkHKKNKLPIVNaagELVALATrgyFKDARS 212 Volvox carteri f. nagariensis
P50098    191 AMDVLNrSRHGYLPVLNdkdEVVCLCS---RRDAVR 223 Trypanosoma brucei brucei
P39567    200 GNEILKkIKKGRLLVVDekgNLVSMLS---RTDLMK 232 Saccharomyces cerevisiae S288c
CBN74980  199 AQEIIKvSKKGYLPIVDaegNLCALTT---RTDLLK 231 Ectocarpus siliculosus
ABO94702  184 NEQILLeSKRGKLPIVDakrYLIGLLT---RATIKD 216 Ostreococcus lucimarinus CCE9901
Q7SFX7    205 ANKILAeSKKGKLPIIDkegNLVSMIS---RSDLTK 237 Neurospora crassa OR74A
EFN52824  231 AMQLLKaSKRGKLPIVNssgELLALAT---RALFRE 263 Chlorella variabilis
EKD28385  179 ANKILKeCRKGKLPVVDqdgNLVAIVS---RKDIRK 211 uncultured bacterium

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