Conserved Protein Domain Family
RhoGAP_fMSB1

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cd04401: RhoGAP_fMSB1 
RhoGAP_fMSB1: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of fungal MSB1-like proteins. Msb1 was originally identified as a multicopy suppressor of temperature sensitive cdc42 mutation. Msb1 is a positive regulator of the Pkc1p-MAPK pathway and 1,3-beta-glucan synthesis, both pathways involve Rho1 regulation. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
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PSSM-Id: 239866
Aligned: 10 rows
Threshold Bit Score: 208.356
Created: 18-Apr-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative GTPasecatalytic
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                  #                                   
NP_014831   69 FSREKv----KGVIHVITAELKe---------kGPDVEFLMIPFRPEQTNdk------lLTLLNQLFPlgngqpvnek-- 127  baker's yeast
XP_762209  232 RIAESq----DHVYHMIQLFLLs---------iDVSTYISVFPILPENALdhf---grnTASINHHVTsqqaksqvarq- 294  Ustilago maydis 521
XP_506011  166 VPRPLv----HDLVHVITGEIKa---------rGILTPYLLLPFRPDSDPda------vPALVNHIFPknfqplqgee-- 224  Yarrowia lipolyt...
XP_762026  200 LSAVRv----LALLEACAQQIRs---------rGLDNPLIFSSMALDLSPsn------vASLIRNYSTsaatqaslpp-- 258  Ustilago maydis 521
EAL20669   123 GLQEV-----GWVIKNVGDELEq---------rGLTTPLLFSNQALELNQtrtr--mliQSFIETLSPndrmrarqna-- 184  Cryptococcus neo...
AAS50511    37 FAAESv----KGVVHMITLQLKa---------eGVADSYVLLPFRPEHANrk------lLAFLNAVFPlgngqavpra-- 95   Ashbya gossypii ...
XP_965028   45 VDPEEv----VELIILSTEELKs---------rALDIPFFLLPFRPTSDPsa------vRTFVRHFFDkqnggpairge- 104  Neurospora crass...
XP_710180   49 FTRKNl----KSALHIITQELKk---------rGTKTPHIFLPFRSKVNDek------lESFLSSIAPsgelrtdntl-- 107  Candida albicans...
CAG98065   158 ISASSaryviHYLTNNFKEQLLnrfshqnnnldTDVLKASMEIFKPNLSHfssseihhcKKIIRSFFPwqgcsltgtale 237  Kluyveromyces la...
AAS50438   129 VTPTSgryviFQLAAFFIEQLNsqlgt--gsnsTDMIRAAMEIFKPNLSHysfsetqqiRQLLASFFPragctlagtal- 205  Ashbya gossypii ...
Feature 1                             #   #                                                    
NP_014831  128 -----kqlrivskadVWTLFQCLKYIWCR----------LPNSEIIg---------------wKSYLEFKFreedkkfPR 177  baker's yeast
XP_762209  295 -----eldkelryaaPHDVVSVMKWGLRHm--------rLRTTDFSskd------------slEWYDIFVAaeresdyHA 349  Ustilago maydis 521
XP_506011  225 ------llrtvrnadIYTLCGVLKWCWCR----------MPGGVVSw----------------PVYNTFVQaekdgemDH 272  Yarrowia lipolyt...
XP_762026  259 -----afldelryanPHDLAATIKWAFARmgrvlavpvpLPGSKKGemreemvyvhqrgfldlETYNAWREqerrhqyPA 333  Ustilago maydis 521
EAL20669   185 ------fihdirfakEHELAWFLRWALSRit------rvKEGTKMIchgv----------mewEVYEEWRGreraanyPA 242  Cryptococcus neo...
AAS50511    96 -----karhvigetdSWTLVQALKYIWCR----------LPGEQVIg---------------wETYWRFRAeerklgyPS 145  Ashbya gossypii ...
XP_965028  105 -----alqqelrmtePMVISGVIKWCWSR----------LEGGVVGw----------------DAYELFKVgeqdsnmAR 153  Neurospora crass...
XP_710180  108 ------lqqlcsetdEFTLISALKYFWSR----------LPNNEIIg---------------wDVYLEFKRreaekgyPK 156  Candida albicans...
CAG98065   238 kaiaehygdysnpkhWTRLILSLRIIWSH----------LSHGIVPw----------------KCYQDFCQlesrnnyPT 291  Kluyveromyces la...
AAS50438   206 ----reaierefrnnWNRLILALRILWAE----------LPESIVPw----------------DCFITFKRleerdgyPT 255  Ashbya gossypii ...
Feature 1                                                  #  ##                               
NP_014831  178 KSFLEIMPQClaSPNHASIVYDFFDLIISISSN--SRVNKMSARKISKMCAIWAFskqipnsdiqdydfesaamksfapn 255  baker's yeast
XP_762209  350 RAIADLLHPSl-PQATAELLSEVLDLMASVAAH--SSTNHMPASALCQVLGFWLFgrigvahppp--------------- 411  Ustilago maydis 521
XP_506011  273 DAFLTLIPRCisTEAHASILYDFMDLLAAIATH--GKKNGMGGRKLARLAGSWAFdvntgadgpv--------------- 335  Yarrowia lipolyt...
XP_762026  334 TAFRDFLSHL--APENVKLLSSLFSLLSSTASY--SFKNGMMPAKLCKHFGPLLFglpedetf----------------- 392  Ustilago maydis 521
EAL20669   243 DAFPFLAQLVp-PDVYNLILTPLFHLLSRFAAH--SHLSGLTPHALSSLFAPLLFdtptstta----------------- 302  Cryptococcus neo...
AAS50511   146 DAFMQVLPGClsSSSHASIVYDFFDLLVAVAAN--VSENRMSGRKVAKMSAIWAFgdyrhpdgggn-------------- 209  Ashbya gossypii ...
XP_965028  154 DSFKTFIPLSvdNRARTEIIFQFFDLLSAVAAH--GKMNGFGGRKLSRMAAWWAFehddggqg----------------- 214  Neurospora crass...
XP_710180  157 NAFLSIMPKClsSPAHASIVYDFLDLILSITSN--SQFNYLSGRKISKMASFWAFscrqqflqspfydat-----qeeae 229  Candida albicans...
CAG98065   292 MSFYNLLPQClpNHDYTCSTFEFLEVLVAIISKidLVVDKNAQMDLIFTAGQVCFvkdqnlqrhlqdns--------knd 363  Kluyveromyces la...
AAS50438   256 SAFFMLLKQVlpSHDYMCTTYAFLEILVTIVGRtdLLVEKTTQMDLIFTAGQVCFpsckaveeykdand--------egn 327  Ashbya gossypii ...
Feature 1                    #            
NP_014831  256 nsiqdgldqwIPASDAMFHLLLAFLRS 282  baker's yeast
XP_762209  412 -tvdelieavSKTTAMAEHLLLAHIRS 437  Ustilago maydis 521
XP_506011  336 -sfqdgldawSRAAEATNHLFFSFLRT 361  Yarrowia lipolytica CLIB122
XP_762026  393 ---artydayVRASNATEHLLLAYIRF 416  Ustilago maydis 521
EAL20669   303 ---ltshaifVRSACATEHLLLASIRS 326  Cryptococcus neoformans var. neoformans B-3501A
AAS50511   210 nsfqeglaqwRRGANAMFHLFLAFLRA 236  Ashbya gossypii ATCC 10895
XP_965028  215 --feggykswLKAADATSHLFFAYLRC 239  Neurospora crassa OR74A
XP_710180  230 hnfiegidtwKKSTNALFHLVLAFLRS 256  Candida albicans SC5314
CAG98065   364 pdlislgklyYARGTALLHLFVAYLRS 390  Kluyveromyces lactis NRRL Y-1140
AAS50438   328 ddelilnkiyRNRGSALYHLFVAYLRS 354  Ashbya gossypii ATCC 10895

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