Conserved Protein Domain Family
RhoGAP_fBEM3

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cd04400: RhoGAP_fBEM3 
RhoGAP_fBEM3: RhoGAP (GTPase-activator [GAP] protein for Rho-like small GTPases) domain of fungal BEM3-like proteins. Bem3 is a GAP protein of Cdc42, and is specifically involved in the control of the initial assembly of the septin ring in yeast bud formation. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
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PSSM-Id: 239865
Aligned: 7 rows
Threshold Bit Score: 303.126
Created: 16-Aug-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative GTPasecatalytic
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                    #                                 
XP_965655 1122 VFGAPLAEAVRYNapad-vrvpLPAVVYRCIQYLDakdAINEEGIFRLSGSNVVIKQLKERFNNEGDINLvddg------ 1194 Neurospora crass...
1723237   1062 IFGLPLNEAVNIStqfn--dsgLPIVVYRCIEYLEscrAEKEEGIYRLSGSASTIKHLKEQFNEGVDYDLlssd------ 1133 fission yeast
XP_757175  857 VFGVPLAESIAISsihe--glaLPSVVYRCIEYLEkrnAFMEEGIYRLSGSSAVIKTLKDRFNMEGDVDLlaen------ 928  Ustilago maydis 521
2828204    904 IFGSSLETCLRLSshkyqnvydLPSVVYRCLEYLYknrGIQEEGIFRLSGSSTVIKTLQERFDKEYDVDLcrynesieak 983  baker's yeast
XP_503669  954 VFGVPLLQAIESSskdi-dghvVPSVVWRCIQYLDdqkAHFEEGIFRLSGSASAIRILKARFNDHYDIDLvsds------ 1026 Yarrowia lipolyt...
CAG90868   853 IFGRELSVAYELSnhkl-fdrsIPSICYRCLDFLLkagAIYEEGIFRLSGSASSIRQLKDQFNTNFDLDLfesp------ 925  Debaryomyces han...
XP_720521  940 IFGSELEIAFELSnhef-mgrkIPSICYRCLDFLMktgAIYEEGIFRLSGSASSIRQLKDQFNTRYDVDLfqss------ 1012 Candida albicans...
Feature 1                         #   #                                                        
XP_965655 1195 -------qyhDIHAVASLLKAYLRELPTTILTrDLHPEFQSVteklp----------dqaqRIAALSVLVEr---LPQAN 1254 Neurospora crass...
1723237   1134 -------eefDVHVIAGLLKLYLRNLPTNLLDtSMHKLFELLpnvp-----------ndsaALGELCDVISk---LPPEN 1192 fission yeast
XP_757175  929 -------eyyDPHAIAGLLKTFLRELPTSVLTrELHMDFMRInelq-----------drveRVNELGHLVSq---LPLAN 987  Ustilago maydis 521
2828204    984 ddeaspslyiGVNTVSGLLKLYLRKLPHLLFGdEQFLSFKRVvdenh---------nnpvqISLGFKELIEsg-lVPHAN 1053 baker's yeast
XP_503669 1027 ------stvfDVHAVAGLLKLFLREMPSLILTqQLSPAFRRAmeip-----------divnRIYELKTLVKq---LPAES 1086 Yarrowia lipolyt...
CAG90868   926 -------lqpDMHTVSGLLKTYLRELPTPILGgQQYNDLKHIadtrge-------sssrseLALIFRDYLSnssnIDDIH 991  Debaryomyces han...
XP_720521 1013 -------lkpDIHTVSGLFKSYLREMPTPIIGgNAVNHLSALvshntyqqqqqatgmsnsdLAIVFRDYFNdvnnVDQIH 1085 Candida albicans...
Feature 1                                #  ##               #          
XP_965655 1255 GTLLRYLIAFLVKIINhaDSNKMTVRNVAIVFSPTLNIpapvFALFLQNYEAIFGID 1311 Neurospora crassa N150
1723237   1193 FALLDSLLHHLRRIIAfeKVNKMNIRNVCIVFSPTLNIpsdiFMMLILNYDHIFTDI 1249 fission yeast
XP_757175  988 YSLLRTLCSHLIKIIEhsDVNKMTMRNVGIVFSPTLAIgagiFALFLTEFDAVFETD 1044 Ustilago maydis 521
2828204   1054 LSLMYALFELLVRINEnsKFNKMNLRNLCIVFSPTLNIpismLQPFITDFACIFQGG 1110 baker's yeast
XP_503669 1087 RDLLFVLAQYLCKIIEhqDYNKMNLRNVGIVFSPTVNVpagiFVLFLTDFDCIFGDA 1143 Yarrowia lipolytica CLIB122
CAG90868   992 YNVCYVIFKFLHQIIAnkGTNRMNLRNVCIVFVPTLNIslevLTILLVDFDCIFEGG 1048 Debaryomyces hansenii CBS767
XP_720521 1086 YDLSFLVFSFLRQIIQqsDINRMTLKNVGIIFEPTLNI----NVEVLCIFLVEFDTI 1138 Candida albicans SC5314

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