Conserved Protein Domain Family
RhoGAP_DLC1

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cd04375: RhoGAP_DLC1 
RhoGAP_DLC1: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of DLC1-like proteins. DLC1 shows in vitro GAP activity towards RhoA and CDC42. Beside its C-terminal GAP domain, DLC1 also contains a SAM (sterile alpha motif) and a START (StAR-related lipid transfer action) domain. DLC1 has tumor suppressor activity in cell culture. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
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PSSM-Id: 239840
Aligned: 9 rows
Threshold Bit Score: 368.669
Created: 12-Apr-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative GTPasecatalytic
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                #                                     
Q96QB1     635 DRSVFGVPLTVNVQRTGQPLPQSIQQAMRYLRnhCLDQVGLFRKSGVKSRIQALRQMNegaidcv-------nyegqsAY 707  human
XP_420693 1204 DRNVFGVPLQVNVQRTGQPLPQSIQQAMRYLRnhCLDQVGLFRKSGVKSRIQALRQMNesstdsv-------nyegqsAY 1276 chicken
XP_309064  511 DRKVFGMPLVLNLQKYGSTVPHTIRLAFGWLEknALDQVGLFRKPGVKSRIAKLKSVIeasndvgwr---semfdeyhAY 587  Anopheles gambia...
AAL68254   559 DKKVFGVPLLMILQRSGQTLPLAVRAAFRWLQlnALDQVGIFRKSGGKSRIMKLREQIevtdstaec---mdvfdlqqAY 635  fruit fly
AAH70794   597 DKNVFGVPFLLNVQRTGHPIPKSILQAMEYLRihFLDQVGLFRKSGVKSRIQSLREMNeqdckyv-------nyegqsAF 669  African clawed frog
XP_969885  325 DRSIFGVPLTIMLQRTGQSIPRNIEEALQWLHqnAADHVGLFRKSGVKSRIQILRNMVdatteil-------nyndqqSY 397  red flour beetle
XP_687363  635 DKNVFGVPLIVHVQRFGQPLPLGMQQALRYLRsqCLDQVGLFRKSGVKSRIQALRQMNesspddv-------nyedqsAY 707  zebrafish
NP_497694  384 DGAVFGVGLDVIFNRTGYFLPRPILEVMKFLRniAPETVGIFRKNGVKSRIAELRSIIesysgntdvfvgenlldstqVH 463  nematode
XP_394183  496 DKTVFGVPLLLSLQRTGQALPKCIQIALRWLRanALDQVGIFRKSGVKSRIQKLKMMTetlgdni-------nfdgqqAF 568  honey bee
Feature 1            #   #                                                                    #
Q96QB1     708 DVADMLKQYFRDLPEPLMTnKLSETFLQIyQYVPkdqRLQAIKAAIMlLPDENREVLQTLLYFLSDVTAaVKENQMTPTN 787  human
XP_420693 1277 DVADMLKQFFRDLPEPLMTnKLSETFLQIyQYVPkdqRLQAIKAAIMlLPDENREVLQILLYFLSDVTAaVKENQMTPTN 1356 chicken
XP_309064  588 DVADLVKQYFRELPDPLLTaKLSETFIAIfQYLPnevRAEAVQSAILlLPDEHREVLHLLLTFLEKVVQnSSLNQMTANN 667  Anopheles gambia...
AAL68254   636 DVADMLKQYFRELPESLLTtKMSETFVAIfQHLPaevRLDAVQCAVLlLPDENREILYVLLEFLTIVAAnSQQNQMTSNN 715  fruit fly
AAH70794   670 DVADMVKQYFRDLPEPIFTsKLCESFLHIfQYLPkdqQFRAVQAAILlLPDENRDALKILLYFLRDVVAcVKENQMTPTN 749  African clawed frog
XP_969885  398 DVADMIKQYFRELPETLLTnKLSETFILIfQYVPpylRRESVLCAILlMPDEHVEVLQFLLHFLLQIAEhATTNQMNESN 477  red flour beetle
XP_687363  708 DVADMVKQFFRDLPEPLLTsKLGETFLHIyQYVPkeqRLQAVQAAIMlMSDENREVLQTLLCFLSDVTSsVQENQMTPMN 787  zebrafish
NP_497694  464 DVADLLKQYFRDLPEPLMTvKMSEVFANIcSVVPdveRITALQYAILlLPDENREALKTLLLFLKEVSRnSQVNNMTAQN 543  nematode
XP_394183  569 DVADLVKQYFRELPEALLTnKLSETFIAIfQHVPvklRPDAVQCVLLlLPDEHREALETLLDFLNHVASnAPYNQMTASN 648  honey bee
Feature 1        ##                                            #                    
Q96QB1     788 LAVCLAPSLFHLntlkrenssp---rvmqrkqslGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEEM 853  human
XP_420693 1357 LAVCLAPSLFHLntlkrenssp---rvmqrkpslGKPDQKDLNENLAATQGLAHMIAECKKLFQIPEEM 1422 chicken
XP_309064  668 LSVCFAPSLFYLlsgnrytaas--prrkktgagsGTPDEKELSEAKASHECLAYMVEHFQTLWTISSDQ 734  Anopheles gambiae str. PEST
AAL68254   716 LGVCLAQSIFHSsistgsasvs--asprrkgkgsGMPDMKELAEAKASHECLSFMIEHYKQIYTAAKEK 782  fruit fly
AAH70794   750 IAVCLAPSLFHLntlrressss--srssqrkyslGKPDQKDLSENLAATQGLAHMIAECNRLFQLPDYW 816  African clawed frog
XP_969885  478 LALCFAPSLFHYsqssf-------------kqnfGSPHPKELAETRAGHDCLLYFLKNYNALFKVPKEF 533  red flour beetle
XP_687363  788 LAVCLAPSLFHLnilkkdnltpr-amhmqkkyatGRPDQKDLNENLAATQGLAHMITECNRLFEIPHEM 855  zebrafish
NP_497694  544 LSVCFTPSLFQLgasrldkvtpg-nrrhktvgatGLPSEKEMKEARACQLCLTMLIEYVQTVFMVPDGL 611  nematode
XP_394183  649 LAVCLAPSLFHFnhsntnvtnrsssvsprrrktvGIPDQRELSENKAAHDCLLYLVKMHRELFMVSSDM 717  honey bee

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