1F7C


Conserved Protein Domain Family
RhoGAP_Graf

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cd04374: RhoGAP_Graf 
Click on image for an interactive view with Cn3D
RhoGAP_Graf: GTPase-activator protein (GAP) domain for Rho-like GTPases found in GRAF (GTPase regulator associated with focal adhesion kinase); Graf is a multi-domain protein, containing SH3 and PH domains, that binds focal adhesion kinase and influences cytoskeletal changes mediated by Rho proteins. Graf exhibits GAP activity toward RhoA and Cdc42, but only weakly activates Rac1. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
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PSSM-Id: 239839
Aligned: 10 rows
Threshold Bit Score: 362.096
Created: 12-Apr-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative GTPasecatalytic
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                           #                         
1F7C_A     12 MDGREPVYNSNKdnqse------gtaqLDSIGFSIIKKCIHAVEtrGINEQGLYRIVGVNsrVQKLLSILMDpkt-ateT 84  chicken
AAN65297   40 TDGLRSFHKASAflpgfvv--dncnaqLDDIGFEFVQQCIDILEesGIHEQGVYRNCGVTskVQKMMMLGLDrrkasekG 117 nematode
AAO39581  216 MDGTEPTYLAPGkikvs------eayhLDEAGFMFIRRCIQVLEirGLEDEGIYRKSGVGtkISKLLALGLNqke-sddV 288 fruit fly
Q9UNA1    364 MDGREPVYNSNKdsqse------gtaqLDSIGFSIIRKCIHAVEtrGINEQGLYRIVGVNsrVQKLLSVLMDpkt-aseT 436 human
O60890    363 MDGKEPIYHSPItkqq--------emeLNEVGFKFVRKCINIIEtkGIKTEGLYRTVGSNiqVQKLLNAFFDpk---cpG 431 human
XP_686610 364 MDGKEPIYHSPIqkqa--------emeLNDLGFKFVRKCINFVEtkGLTQEGVYRTVGSNiqVQKLLNAFFDsk---cpA 432 zebrafish
AAH77177  367 LDGKESRFLSLSrsvsrp----eggarLDKYGFAIVKNCIRAIEtrGINEQGLYRVVGVSskVQRLLSLLIDvk---tcC 439 African clawed frog
XP_694637 360 MDGKEPVYIRYCrlmfiilkrsvstafLNEAGFNFVRKCIESVEarGINTLGLYRIGGVNskVQRLMTSVFGkkt-aspA 438 zebrafish
XP_970279 259 MDGKEPTYTTPGvnkaqn----seerlLDDLGIQFVKKCIEVLEsrGLEEQGIYRVVGVTskVNKLLNMGLDrrk-cdkL 333 red flour beetle
NP_078881 367 LGGKEALSHSFNtaiipr---pegnaqLDKMGFTIIRKCISAVEtrGINDQGLYRVVGVSskVQRLLSMLMDvk---tcN 440 human
Feature 1                        #   #                                                        
1F7C_A     85 ETEICA--EWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKlenqesRVSEIHSLVHrLPEKNRQMLHLLMNHLAKV 162 chicken
AAN65297  118 GLNLRDd-EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKmgdatmRIDHIHFYVHqLPAQHLRMLEIVVRHLKRV 196 nematode
AAO39581  289 FVDDKYrdLMESNTIASALKMYLRNLNEPLMTYQYHSDFIEAAKqetlnqRVNEVHKLVYkLPQPNFQMLDMVICHLTDV 368 fruit fly
Q9UNA1    437 ETDICA--EWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKlenqesRVSEIHSLVHrLPEKNRQMLQLLMNHLANV 514 human
O60890    432 DVDFHNs-DWDIKTITSSLKFYLRNLSEPVMTYRLHKELVSAAKsdnldyRLGAIHSLVYkLPEKNREMLELLIRHLVNV 510 human
XP_686610 433 DVDFNSs-DMDIKTITSALKFYLRSLSEPLMTYSLHGELILAAKsenldyRLGAVHSLVYkLPERNREMLELLIKHLVSV 511 zebrafish
AAH77177  440 DVDLDNseEWEVKTVTSALKLYLRSLPEPLMTYEMHDQFINLAKsgspesRVNAIHILIHkLPEKNREMLDILITHLANV 519 African clawed frog
XP_694637 439 DLDLDPd-TWDNKTITSGLKNYLRCLAEPLMTYRLHKDFIMAVKsddqnyRVCAVHALVYkLPDKNKEMLNLLIKHLHVV 517 zebrafish
XP_970279 334 SLEDPQ--EWETKTITSALKSYLRNLPEPLMTYKYHNGFIAAVKnetrqmRIHDVHTLIHrLPKTNFEVIKILIKHLTNV 411 red flour beetle
NP_078881 441 EVDLENsaDWEVKTITSALKQYLRSLPEPLMTYELHGDFIVPAKsgspesRVNAIHFLVHkLPEKNKEMLDILVKHLTNV 520 human
Feature 1                 #  ##                      #         
1F7C_A    163 ADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIEN 211 chicken
AAN65297  197 ADLSNENLMTVSNLGVCFGPTLLRPKEETVAAIMDIKFCNVVVEVLISN 245 nematode
AAO39581  369 SRKYEKNKMSVFNLGVVFGPTLLRPREESVAAILDIKFNNIVINILIDN 417 fruit fly
Q9UNA1    515 ANNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIEN 563 human
O60890    511 CEHSKENLMTPSNMGVIFGPTLMRAQEDTVAAMMNIKFQNIVVEILIEH 559 human
XP_686610 512 CSHSSENLMTVSNMGVIFGPTLMRAEEETVAAMLDIKFQNIVMEILIED 560 zebrafish
AAH77177  520 AHHAKKNLMTVANLGVVFGPTLMRPQEETVAAIMDLKFQNIVVDILIQS 568 African clawed frog
XP_694637 518 STHSQKNLMTVSNLGVIFGPTLMRSQEETVAAMMNIKFQNIVVEILIEN 566 zebrafish
XP_970279 412 SAKSDKNLMTVSNLGVCFGPTLLRPEEETVASIMDLKFYNIVVEILIEN 460 red flour beetle
NP_078881 521 SNHSKQNLMTVANLGVVFGPTLMRPQEETVAALMDLKFQNIVVEILIEN 569 human

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