2J3L


Conserved Protein Domain Family
ProRS-INS

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cd04334: ProRS-INS 
Click on image for an interactive view with Cn3D
INS is an amino acid-editing domain inserted (INS) into the bacterial class II prolyl-tRNA synthetase (ProRS) however, this CD is not exclusively bacterial. It is also found at the N-terminus of the eukaryotic/archaea-like ProRS's of yeasts and single-celled parasites. ProRS catalyzes the attachment of proline to tRNA(Pro); proline is first activated by ATP, and then transferred to the acceptor end of tRNA(Pro). ProRS can inadvertently process noncognate amino acids such as alanine and cysteine, and to avoid such errors, in post-transfer editing, the INS domain deacylates mischarged Ala-tRNA(Pro), thus ensuring the fidelity of translation. Misacylated Cys-tRNA(Pro) is not edited by ProRS. In addition to the INS editing domain, the prokaryote-like ProRS protein contains catalytic and anticodon-binding domains which form a dimeric interface.
Statistics
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PSSM-Id: 239826
Aligned: 140 rows
Threshold Bit Score: 136.488
Created: 1-Aug-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:putative deacylase active site [active site]
Evidence:
  • Comment:A mutation of the conserved lysine to arginine in Haemophilus influenzae YbaK abolishes activity.
  • Comment:A mutation of the conserved histidine forms part of the amino acid specificity pocket of the editing site and, in the case of ProX and bacterial ProRS-INS, restrictis access to small amino acids such as alanine.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                            #                          
2J3L_A      226 ESDYAANLEMATSLYTPkkshetqLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLFIAde------------ePVMVL 293 Enterococcus fae...
NP_900244   226 TSEYAANIELAEAVAPAgerpaasAALAKVHTPKVKTIAELVDFLKIDIKQTVKAVVVEGeq-----------deAVLML 294 Chromobacterium ...
YP_114445   226 VSDYAANVEQAEALAPTaprpaptAALLKVETPGKKSIAEVSEFLGVPPHQILKTVAVMQtivddd---gldrdmFVTVL 302 Methylococcus ca...
Q39JU3      226 TSEFAANIEAAEALPLIaeraapaEAMEKVATPGKAKCEAVAELLAIPLERTIKSIVLATdneg-------aeptIWLVM 298 Burkholderia sp....
AAZ45401    226 DSGYAANVELAEAMAPNearaaasTLMEKTHTPGKMACADVAKFLELPLDRIVKSIAVMSeked-------gsqtFALLL 298 Dechloromonas ar...
YP_315870   229 DSDYAANVELAEALAPAaargapqEAMREVETPKQTTCEDVAALLGIPLARTVKLIAVMAge------------rMVVVL 296 Thiobacillus den...
YP_411150   226 DSDYAANVEMAESLPPAglreaaaGEMQKVRTIAQKTCEEVAAYLNVSIEQTVKTLAVMAng------------gMHLLL 293 Nitrosospira mul...
Q3BP90      226 GSDYAANVETASAAPPApra-aasEAMQQVATPTQKTCEDVAQLLGIALQRTVKSVAVMTqa------------gFVLVL 292 Xanthomonas camp...
CAD85228    226 ASDYAANIELAEAVPHGiprkepaGIMAKIATPDRKSCQDVADFLGIPVEQTLKALAVTAgg------------kFYLLL 293 Nitrosomonas eur...
ZP_01915416 226 SSDYAANVELAEAVCTAqrp-vasKTMDKVHTPGNSTCEAVAAQLGLALTATVKSVVFANeylekdetkpvkkvqIVLAL 304 Limnobacter sp. ...
Feature 1                                             ##                             #          
2J3L_A      294 VRGDHDVNDVKLKNFLGad-fLDEATEEDArrvlGAGFGSIGPVNvs---edVKIYADLAVQDLANAIVGANEDGYHLTN 369 Enterococcus fae...
NP_900244   295 VRGDHELNEVKAQKVAGiknpLAFASPAAIrdafGANPGSLGPVGf-----kGRVIADRTVAKMADFVIGANEDDQHYTG 369 Chromobacterium ...
YP_114445   303 LRGDHELNEVKLGKVLGr---FRFASEDEIerhmGCRPGYIGPLNlpagtavGPVYADRAVAVMSDFVCGANEAGYHFSG 379 Methylococcus ca...
Q39JU3      299 LRGDHDLNEIKVSKLPGlk-nHRFATEQEIvewfGTPPGYLGPVGtk---kpVKVIADRTVANMSDFVVGANEVDYHIAG 374 Burkholderia sp....
AAZ45401    299 LRGDHELNEIKASKIAAin-pFRFATEEEVierlGCKPGFIGPVAida--tkVAVFADRSVANMSDFVCGANEAGYHMTG 375 Dechloromonas ar...
YP_315870   297 LRGDHMLNEVKLAKIEGla-dFRLANEAEIravfDCPPGFLGPVGidr--stIRVIADRAVAVMSDFVCGANKPKFHLAG 373 Thiobacillus den...
YP_411150   294 LRGDHHLNETKVRKIPFls-dFRLASEEEIrtetGCLPGFIGPAGl-----sLPVIADLTVATMSNFVCGANEEDYHLVN 367 Nitrosospira mul...
Q3BP90      293 VRGDHAVNEIKLAKVPGla-dYRLANESEIrehlGCEPGFLGPVNta---rpVRVVADRDVAALADFVVGANVSGAHLVG 368 Xanthomonas camp...
CAD85228    294 LRGDHQLNETKVRKIPFlg-dFEFAEESRIiaemSCPPGYLGPVGv-----kAEIIADRAVLEMSDFTCGANEEGFHLSH 367 Nitrosomonas eur...
ZP_01915416 305 VRGDHEVNDIKLGKLAGvq-eLRLATEAEIvaafGTQPGYLGPVGls---pdVRVVADRSVAAMGDFVCGANAADYHYAG 380 Limnobacter sp. ...
Feature 1                         
2J3L_A      370 VNPDRDFq---pISYEDL 384 Enterococcus faecalis
NP_900244   370 ANFGRDCa---ePEVFDI 384 Chromobacterium violaceum ATCC 12472
YP_114445   380 VNWERDLplpqdEYLCDL 397 Methylococcus capsulatus str. Bath
Q39JU3      375 VNWGRDLp---ePDVADV 389 Burkholderia sp. 383
AAZ45401    376 VNFGRDLp---ePEVFDI 390 Dechloromonas aromatica RCB
YP_315870   374 VNFGRDLqe--pDLVADI 389 Thiobacillus denitrificans ATCC 25259
YP_411150   368 VNFGRDLke--pDHVFDI 383 Nitrosospira multiformis ATCC 25196
Q3BP90      369 VNWGRDLpe--pETVADV 384 Xanthomonas campestris pv. vesicatoria str. 85-10
CAD85228    368 VNFGRDLpl--pDQVFDI 383 Nitrosomonas europaea ATCC 19718
ZP_01915416 381 VNWGRDLp---ePEVSDI 395 Limnobacter sp. MED105

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