Conserved Protein Domain Family
AAK_AKi-DapG-BS

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cd04260: AAK_AKi-DapG-BS 
AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two beta subunits; the alpha (43 kD) and beta (17 kD) subunit formed by two in-phase overlapping genes. The alpha subunit contains the AK catalytic domain and two ACT domains. The beta subunit contains two ACT domains.
Statistics
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PSSM-Id: 239793
Aligned: 8 rows
Threshold Bit Score: 409.085
Created: 7-Oct-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative catalytic residues [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #                                              #                          # 
6226837       3 IIVQKFGGTSVKDdk-gRKLALGHi-kEAISEGYKVVVVVSAMGRKGDPYATDSLLGLLygdqsaISPREQDLLLSCGET 80  Bacillus subtilis
NP_784688     3 IIVQKFGGTSVKDeaarIQALKHVq--YAVDQGDKVIVVVSAIGRKGAPYATDSLLGLVgaehsrLTNRELDMLVSVGET 80  Lactobacillus pl...
YP_075377     3 IIVQKFGGTSVATpegrEAVVRRVr--QALDDGYATVVVVSAMGRQGDPYATDTLIQLAqsagpdLAPREMDLLLSCGEI 80  Symbiobacterium ...
BAB81384      3 IVVQKFGGTSVSTkerrTMVVEKVk--GAINKGYLPVVVVSAMGRKGEPYATDTLLGLVseefkkENKLATDLLMGCGEI 80  Clostridium perf...
EAM98260      3 VLVQKFGGTSVSSaerrAQVAAKVs--EAVREGYSPVVVVSAIGRSGDPYATDTFINLVngitleSPKREMDLLMSCGEI 80  Desulfitobacteri...
ZP_01189941   3 IIVQKFGGTSLDTqekrEIAARHIk--SAVERGNYPVVVVSAMGRKGDPYATDTLINMVyrvsedIDPREKDMLMSCGEV 80  Halothermothrix ...
ZP_00801907   3 IVVQKFGGTSVSTkerrTQVINKIl--QTKQKQKNIVVVVSALGRKGDAYATDTLRNLLleenplCSLKTLDLLMSCGEI 80  Alkaliphilus met...
ZP_01231707   3 ILVQKFGGTSVESyekmNEVCKIVkayKKNDEELQLVLVVSAMGRKGAPYATDTLINLCsavndePSKRELDLIMSCGEI 82  Clostridium diff...
Feature 1                                                                                     # 
6226837      81 ISSVVFTSMLLDNGVKAAALTGAQAGFLTNDQHTNAKIIEMKPERLFSVLANhDAVVVAGFQGATEKGDTTTIGRGGSDT 160 Bacillus subtilis
NP_784688    81 ISTAVFTELARKQGLNVTAMTGHDAGIVTNDDFQNAKILRVDPKPITDAFIDaDVVVVTGFQGATESGHVTTIGRGGSDT 160 Lactobacillus pl...
YP_075377    81 ISSVLMAATLTAAGIPAVALTGGQAGIQTDENYGNAQIVKVDPAPVLSRLKEgLVVVVAGFQGVNAAGEVTTLGRGGSDT 160 Symbiobacterium ...
BAB81384     81 ISTVVMSDELREAEIEAVPLTGGNAGILTDDNYSSADFIDINPKLILEVLKEgKVPVVAGFQGVDRNGFLTTLGRGGSDT 160 Clostridium perf...
EAM98260     81 ISGVVLTSTLKSMGLEAILLTGGQAGIITNDCYGDARIIRVEPKGILDHLSEgRVVVVTGFQGVTEDGQVTTLGRGGSDT 160 Desulfitobacteri...
ZP_01189941  81 ISAVVMVQTLSSFGLKARALTGAQAGIVTDNNFGDSSVIKVNPEKIMELINSnIIPVIAGFQGVNMDGEITTLGRGGSDT 160 Halothermothrix ...
ZP_00801907  81 ISATLLGSALEALGEKVIVLTGAQAGILTDDHFSNAEIIAIDEKRSLSYLEKdYIVVVPGFQGATASGEVTTLGRGGSDT 160 Alkaliphilus met...
ZP_01231707  83 ISGTILANLLNAQGIDSVFFTGQQAGIITSDEYSNAKIKYINPKKVKRALDDgKVVVIAGFQGVTDDGEITTLGRGGSDT 162 Clostridium diff...
Feature 1                                                  #            #                       
6226837     161 SAAALGAAVDAEYIDIFTDVEGVMTADPRVVENAKPLPVVTYTEICNLAYQGAKVISPRAVEIAMQAKVPIRVRSTYSNd 240 Bacillus subtilis
NP_784688   161 SAAILGAALKAKRVDIFTDVNGMMTADPRLVTHARFIKAISYEELANMAHEGAKVIHPRAVEIAEQAHVPMRIRSTYQEp 240 Lactobacillus pl...
YP_075377   161 TAAALGGALRAEVVEIYTDVDGVKTADPRLVAEARTLSVTTYDEIAQMAHYGAKVVHPRAVEIAMQHRVPIRVRSTFSDn 240 Symbiobacterium ...
BAB81384    161 TAAVLGVALKAEEIEIYTDVDGIMTADPRIVGDAELINKISYNEVFQLADQGAKVIHPRAVEIAMKGNVTLVIKNTMSTc 240 Clostridium perf...
EAM98260    161 TASALGVALNAEAIDIYTDVEGIMTADPRIVEDARILDVVTYNEICHLAHQGAKVIHPRAVEIAMQRNIPIWIKCTFSDa 240 Desulfitobacteri...
ZP_01189941 161 TASVIGAAINASFIEIFTDVEGVMTADPSMVDKAKILDKVSYNEVCELAYQGARVLHPRAAEIAMREGIPIRVRSIFNEn 240 Halothermothrix ...
ZP_00801907 161 TATALAVALNAEYVEIYTDVDGIMTADPNVVPRARILDQVNYNEVFQMAEKGAKVIHPRAVEIAQKKNIPVNIRNTMSEh 240 Alkaliphilus met...
ZP_01231707 163 SAVAIGKALECETVEIYTDVDGIMTADPRVEPNAKVLSFIDYEEVFQMADKGAKVIHPRAVQLAKSGNITLAIKNTMNPt 242 Clostridium diff...
Feature 1               
6226837     241 --kGTLVT 246 Bacillus subtilis
NP_784688   241 delGTLVT 248 Lactobacillus plantarum WCFS1
YP_075377   241 --pGTLIT 246 Symbiobacterium thermophilum IAM 14863
BAB81384    241 --iGTMID 246 Clostridium perfringens str. 13
EAM98260    241 --rGTLVT 246 Desulfitobacterium hafniense DCB-2
ZP_01189941 241 --pGTIIQ 246 Halothermothrix orenii H 168
ZP_00801907 241 --pGTRIH 246 Alkaliphilus metalliredigenes QYMF
ZP_01231707 243 f-eGTKIG 249 Clostridium difficile QCD-32g58

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