Conserved Protein Domain Family
AAK_AK-Ectoine

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cd04248: AAK_AK-Ectoine 
AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Statistics
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PSSM-Id: 239781
Aligned: 6 rows
Threshold Bit Score: 493.121
Created: 3-Oct-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative catalytic residues [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #                                       #                                   
AAY96773      4 HTVEKIGGTSMsdyvavrdNIILkpvhredlyqRIFVVSAYGGITDMLLEHKKNgQAGIYGQFANsvnddGWQASLVALk 83  Methylobacter al...
CAG35180      9 LRIEKIGGTTMsrfgevldNVIFydse--difnRIYVVSAYSGVTNALLEHKKThQPGIYQTFVQn---eACDMAMERLk 83  Desulfotalea psy...
ZP_00578445   5 HSVEKIGGTSMaatatlfdNVLIagrsgadlynRIFVVSAYAGMTDLLLENKKTgAPGVYGHFVDdddadAWRRAMAAVr 84  Sphingopyxis ala...
ZP_00560159   2 LTVEKIGGTSMsqfedvlkNIIGepdsqrfsfgRVFVVSAYAGVTNKLLEDKKTkAPGIYRHFVNg---eDCEEALNVLl 78  Desulfitobacteri...
ZP_00754743   3 YTVEKIGGTSMtafdavleNILLrpeq---lygRVFVVSAYSGMTDALLECKRTgAPGIYQKIAKhd--eSWRDAVYALe 77  Vibrio cholerae ...
ZP_00620824   2 SRVNELVGTLF--------TGGRkpdd---lygRVFVVSAFGGITNLLLEHKKTgEPGVYARFADaesdhGWHEALSRVg 70  Silicibacter sp....
Feature 1                                                                        #              
AAY96773     84 qam-faiNANIFDTAdaikKADTFIGERLDDAERCLADLQHLCRHGHFSLDAHLSTVREMLASLGEAHSAWNTVQLLQqD 162 Methylobacter al...
CAG35180     84 ttl-ceiNRGFADIGldleVANNFICKRIQDAVEVLHSMANVLSSGYVNRSEMLLAARELLASIGEMHSAFNSANILQnR 162 Desulfotalea psy...
ZP_00578445  85 aam-harNADMFARGdsraEADRFVDARIDAVTACLDDLARLRSHGRFGLKDQLATVRELLAGIGEAHSAHSTALLLRdR 163 Sphingopyxis ala...
ZP_00560159  79 qdl-lkvNERFVNIGldyeAAKEFLGSRIQQTKSYLHSMHEIIASGYVDRENIFSAARELLASLGEAHSAFNSVNIMQnR 157 Desulfitobacteri...
ZP_00754743  78 qrmllinENMFADAMtr-lRADKFIRARLAEAIACIQNILQTCQYGQFSLRQYLPQIREFLASLGESHSAYNTALKLNtL 156 Vibrio cholerae ...
ZP_00620824  71 dem-rkaHEAVLENAgdvaQADAFVSERIEGARNCLIDLQRLCSYGHFRLAEHMLQIRELLSGLGEAHSAYVTALLLQrA 149 Silicibacter sp....
Feature 1                                                                  #                    
AAY96773    163 GINAVFVDLTGWQTDkhmTLDERIKNAFAEIDLrQQLPIATGYAHsiDGLMSTFDRGYSEMTFSRIAVLTKADEAIIHKE 242 Methylobacter al...
CAG35180    163 GYKASYVDLSGWQDSrdmTIDQRILETFTKFDPsDTICIATGYAKgrEGIMREFDRGYSEVTFSKIAVLLKASEAIIHKE 242 Desulfotalea psy...
ZP_00578445 164 DVNALFVDLTLWDQDdlrSLDERIGEAFAAIDLrDTLPIVTGYAGceGGMVRRYARGYTEMTFSRLAVLTGAREAIIHKE 243 Sphingopyxis ala...
ZP_00560159 158 GIPARLVDLTGLRDSsqlTIDERIAKAFRGVDPfKEIVIVTGYTKgkEGIMRQFERGYSEITFSRIATHLHADEAIIHKE 237 Desulfitobacteri...
ZP_00754743 157 GVNARFVDLSGWCEAmqgNLDQVIEEAFRDIDVtSELPIVTGYAScqEGLMRTYDRGYSEMTFSRIAVVTGAQQAIIHKE 236 Vibrio cholerae ...
ZP_00620824 150 GVNARFVDLSGWRDEgdvTLEERISSALNDVDPaTEMPIVTGYAQcaEGLMREFDRGYSEVTFSCLAALTGASEAIIHKE 229 Silicibacter sp....
Feature 1                                #            #                              
AAY96773    243 FHLSSADPRLVGEDKAVPIGRTNYDVADQLANLGMEAIHPKAAKGLRQNDIALRVRNTFEPDHAGTLIT 311 Methylobacter alcaliphilus
CAG35180    243 YHLCSGDPLIIGEDKVHPICNTNYDVADQLADVGMEAIHPKASKQIEIAGISIRIKNSFDPSHSGTLFT 311 Desulfotalea psychrophila L...
ZP_00578445 244 FHLSSADPKLVGEDKARKIGRTNYDVADQLANLGMEAIHPGAGRGLRQSGIPLRVRNTFDREDEGTLVT 312 Sphingopyxis alaskensis RB2256
ZP_00560159 238 FHLSSADPKIVGVEKAIPVGRTNYDVADQLADIGMEAIHPNASKPLEMAGINLRLKNTFEPDHPGTLIS 306 Desulfitobacterium hafniens...
ZP_00754743 237 YHLSSADPRLVGAEKVRPIGLTNFDVADQLANLGMEAIHPNAAAGLRQSNIDLRIKNTFEPDHSGTLIT 305 Vibrio cholerae O395
ZP_00620824 230 FHLSSADPKLVGEGVAQKLGHTNYDVADQMSNMGMEAIHPKAAKTLRQADVPLRVTNAFEPEDPGTLID 298 Silicibacter sp. TM1040

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