Conserved Protein Domain Family
AAK_NAGS-ABP

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cd04237: AAK_NAGS-ABP 
AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Statistics
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PSSM-Id: 239770
Aligned: 34 rows
Threshold Bit Score: 321.427
Created: 14-Nov-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative nucleotide binding site [chemical binding site]
Evidence:
  • Comment:based on similarity to Pyrococcus furiosus carbamate kinase, E. coli NAG kinase, and Campylobacter jejuni glutamate 5-kinase

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                              # ###                                                    
NP_747286     3 DYVNWLRHASPYINAHRDCTFVVMLPGDGVeHPNFgNIVHDLVLLHSLGVRLVLVHGSRPQIESRLADRGltphyhrgmr 82  Pseudomonas puti...
CAB83871      6 LFVAHFREAAPYIRQMRGKTLVAGIDDRLLeGDTLnKFAADIGLLSQLGIRLVLIHGARHFLDRHAAAQGrtphycrglr 85  Neisseria mening...
NP_179875    76 QFVRWFREAWPYLWAHRSCTFVVTISGDVLdGPYCdLVLKDIAFLHHLGIKFVLVPGTQVQIDQLLAERGreptyvgryr 155 thale cress
NP_911900    68 EFVGFFREAWPYIRGHRGSTFVVVISSEVVsGPHFdGILQDISLLHGLGIQFVLVPGTHVQIDKLLSERRmakyvg-qyr 146 Japanese rice
NP_974701    83 QFVRWFREAWPYLWAHRGCTFVVIISGEIIaGSSCdAILKDIAFLHHLGIRFVLVPGTQEQIDQLLAERGreatyvgryr 162 thale cress
YP_044843    15 QYVHWFRHSAPYINAHRNKTLVLMFGGEAVqHPNFqHIIHDIALLHSLGIRLILVHGARPQINQNLQEKQietpihlhrr 94  Acinetobacter sp...
XP_468800    48 RFVGWFREAWPYVRGHRGSTFVVVVSGEVVaGPHLdGILQDISLLHGLGIKFVLVPGTHVQIDKLLSERGkkakyagryr 127 Japanese rice
YP_267223     7 NYVKWFRNAAPYINAHRGKTVVLMFGGEAVtHPNFaNIIHDISLLRSLGVKLVVVHGARPQIVDRMQQRGleenvvsnir 86  Colwellia psychr...
EAO67225      7 DSVKLFRNSAPYINAHRGKTFVLMFGGEAVeDANFaNIIQDIALLNSLGVRLILVHGARPQIDQRAVWRKveprfsedvr 86  Pseudoalteromona...
ZP_01116716   7 DFVSLFRNSAPYIHAYRGKTCVVWLRQQALsPERLkSTVSDLTLLHSLGLKLVLLIDTHHLSTPVSAQAVi--------- 77  Reinekea sp. MED297
Feature 1                                                                                       
NP_747286    83 itDAATLDCVIDAVGALRLAIEARLsmDIAASPMqg---------srLRVASGNLVTARPIGVLEGVDYHHTGEVRRVDR 153 Pseudomonas puti...
CAB83871     86 vtDETSLEQAQQFAGTVRSRFEAAL--CGSVSGFara--------psVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDT 155 Neisseria mening...
NP_179875   156 vtDSASLQAAKEAAGAISVMIEAKLspGPSIYNIrrhgdssrlhetgVRVDTGNFFAAKRRGVVDGVDFGATGLVKKIDV 235 thale cress
NP_911900   147 vtDSDSLEAAMEAAGRIRLTIEAKLspGPPMLNLrrhgvigrwhglvDNVASGNFLGAKRRGVVSGIDYGFTGEVKKIDV 226 Japanese rice
NP_974701   163 vtDAASLQAAKEAAGAISVMLEAKLspGPSICNIrrhgdrsrlhdigVRVDTGNFFAAKRRGVVDGVDFGATGEVKKIDV 242 thale cress
YP_044843    95 vtTRESLACVMNAVGSIRLEIEALLsmGLANSPMfg---------arIDVVSGNFVTAKPYGIRDGVDFQLTGEVRAIDT 165 Acinetobacter sp...
XP_468800   128 itDSDSLEAAMEAAGRIRLTIEAKLspGPPMLNLrrhgvngrwheicDNVASGNFLGAKRRGVVGGIDYGFTGEVKKIDV 207 Japanese rice
YP_267223    87 vtDAQTLVAVKDATGSLRLHIEALLstGVVNSPMhg---------sqIRVSTGNFVIAKPMGVRNGIDYKYTGTVRRIDS 157 Colwellia psychr...
EAO67225     87 itDKQTLECVKDAAGSVRSQIEALLtmGLANSPMhg---------aqIRVCSGNLVVAMPIGVRNGVDFEHTGLVRRVDV 157 Pseudoalteromona...
ZP_01116716  78 --DETLMHELIGQIGHFRYTLEALFsqGLVNSPMhg---------skIRVVSGNFVMARPAGVHQGADLKHQGRVRRIDA 146 Reinekea sp. MED297
Feature 1                                                          ##  ##                       
NP_747286   154 kGISRLLDerSIVLLSPLGYSPTGEIFNlACEDVATRAAIELGAdkLLLFgAEPgLLda-dGRLVRELRp--qQVAPHLQ 230 Pseudomonas puti...
CAB83871    156 aALRFQLDagNIVWLPPLGHSYSGKTFHlDMLQTAASVAVSLQAekLVYLtLSDgISrp-dGTLAVTLSa--qEAQSLAE 232 Neisseria mening...
NP_179875   236 dRIRERLDsgSVVLLRNLGHSSTGEVLNcNTYEVATACALAIGAdkLICImDGPvLDe--nGHLVRFLTl--qEADTLVR 311 thale cress
NP_911900   227 sRIKERLDsdSIVVVSNMGYSSSGEVLN-CTYEVATACALAIEAdkLICIvDGQiFDe--hGRVIPFMSl--eEADMLIR 301 Japanese rice
NP_974701   243 dRICERLDggSVVLLRNLGHSSSGEVLNcNTYEVATACALAIGAdkLICImDGPiLDe--sGHLIHFLTl--qEADMLVR 318 thale cress
YP_044843   166 dAIQRHLDnhNIVVLGPTGYSTTGEVFNlLAEEVATKTATALHAdkLIFLgKKQgLLsd-qGKLLRELTp--qQLEPYIK 242 Acinetobacter sp...
XP_468800   208 sRIKERLDrdSIVVVSNMGYSSSGEVLNcNTYEVATACALAIEAdkLICIvDGQiFDe--hGRVNRFMSi--eEADMLIR 283 Japanese rice
YP_267223   158 dGINMQLDygSIVLLSPIGYSPTGEVFNlALEDVATQTAISLKAdkLIAFtEDEgLIdk-sGKLIRSCSv--rTVKTLLD 234 Colwellia psychr...
EAO67225    158 tGINDHLDdgSIVLLPPMGYSPTGEVFNlSHEDVATNAVKALNAdkLIIFtEKDgLVde-tGRLLRNIQl--nSLYPMLE 234 Pseudoalteromona...
ZP_01116716 147 rGIAEHISreHLVLVPPLGYSVTGDVLYlPAEHLTVELARQLGAdkVLIVgNNPlELtqgrKEIGLAALqnilSQTQPLT 226 Reinekea sp. MED297
Feature 1                                                                                       
NP_747286   231 rlgs---------------------------------------------------------------------------- 234 Pseudomonas puti...
CAB83871    233 hag----------------------------------------------------------------------------- 235 Neisseria mening...
NP_179875   312 kraqqseiaanyvkavgdggissfpeplgyngmvttpnnhigr--piweklsptfqngvgfdngnglwsgeqgfaiggee 389 thale cress
NP_911900   302 krakqsdiaanyvkvvdeegishlhedvkpflngsgplg----------ayaasfhnglgfnngngilsgeqgfaiggee 371 Japanese rice
NP_974701   319 kraqqsdiaanyvkavgdgsmaypeppnntngnitsaqngravsfwgngnhtpifqngvgfdngnglwpceqgfaiggee 398 thale cress
YP_044843   243 hfqql--------------------------------------------------------------------------- 247 Acinetobacter sp...
XP_468800   284 trakqseiaanyvevvgeedisyarnlpikeekelgligrd------fvdgytasfrngvgfnngnglsgeqgfaiggee 357 Japanese rice
YP_267223   235 ekdc---------------------------------------------------------------------------- 238 Colwellia psychr...
EAO67225    235 qahl---------------------------------------------------------------------------- 238 Pseudoalteromona...
ZP_01116716 227 p------------------------------------------------------------------------------- 227 Reinekea sp. MED297
Feature 1                                                          
NP_747286   235 -----dyqGELLDAAAEACKgGVARSHIVSYaeDGALLTELFTRGGGGTLV 280 Pseudomonas putida KT2440
CAB83871    236 -----getRRLISSAVAALEgGVHRVQILNGaaDGSLLQELFTRNGIGTSI 281 Neisseria meningitidis Z2491
NP_179875   390 risrlngyLSELAAAAFVCRgGVKRVHLLDGtiSGVLLLELFKRDGMGTMV 440 thale cress
NP_911900   372 rlsrsnayLSELAAAAFVCHgGVQRVHIIDGtvDGSLLLELFTRDGTGTMI 422 Japanese rice
NP_974701   399 rlsrlngyLSELAAAAFVCRgGVKRVHLLDGtiSGVLLLELFKRDGMGTMV 449 thale cress
YP_044843   248 ----dhemALHLQGAQTASLsGVHRVHLISYayDGALIEELFTRDGIGTMI 294 Acinetobacter sp. ADP1
XP_468800   358 rlsrsngyLSELAAAAYVCNgGVQRVHIIDGtvGGSLLLELFTRDGVGTMI 408 Japanese rice
YP_267223   239 -----hvrQLLLRSIIQSGEnGVERCHCVSYqsDTALLQELFTRDGAGTLI 284 Colwellia psychrerythraea 34H
EAO67225    239 -----qqeKHSIQTIIDSLEsGVSRCHCVSYgqDGALLQELFTRDGAGSLI 284 Pseudoalteromonas atlantica T6c
ZP_01116716 228 -------gYTELNAASAVAAaGIARCHVIDGatDGALLSELFTRDGVGTLI 271 Reinekea sp. MED297

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