Conserved Protein Domain Family
CuRO_1_Ceruloplasmin_like_1

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cd04229: CuRO_1_Ceruloplasmin_like_1 
cupredoxin domain of ceruloplasmin homologs
Uncharacterized subfamily of ceruloplasmin homologous proteins. Ceruloplasmin (ferroxidase) is a multicopper oxidase essential for normal iron homeostasis. Ceruloplasmin also functions in copper transport, amine oxidase and as an antioxidant preventing free radicals in serum. The protein has 6 cupredoxin domains and exhibits internal sequence homology that appears to have evolved from the triplication of a sequence unit composed of two tandem cupredoxin domains. This model represents the first domain of the triplicated units.
Statistics
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PSSM-Id: 259891
Aligned: 8 rows
Threshold Bit Score: 256.96
Created: 4-Jun-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
trinuclear Cu
Feature 1: trinuclear Cu binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:H H H HClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the trinuclear copper binding site of other multicopper oxidases with structure of bound coppers
  • Comment:Trinuclear copper site ligands are typically one or two HxH motifs that can be in the same domain/subunit or in different domains/subunits.
  • Comment:Human ceruloplasmin consists of six domains with one Type 1 (T1) copper each in domains 2, 4, and 6, as well as a catalytic trinuclear copper cluster at the interface between domains 6 and 1.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                      
NP_841583   36 REYWIAAEKTDWNYAPtganqidla----------------------sdlgvwgkTLTYTKYRYIGYTDGSYshpl---p 90   Nitrosomonas eur...
AAL78162   425 RVYYVRAQEVEWSYSGpnntqacavpelqfssepgseevngnvflegpstdpvrlGHIYTKTLLIEYTDASFttvkprpa 504  Chlamydomonas re...
AAL78162    93 NTYFVAADKIQWNYAPsgrnkcfppdlaa--------------kylamqpgitrvGGTFAKAIYRAYTDSSFntlattpa 158  Chlamydomonas re...
AAL78162   805 RTYYIQAEAVNWDYAPagyqkctdtdfsy-------------qssvylrrtsytiGSRYRKAVYRAYTDATFstrv---p 868  Chlamydomonas re...
AAX88807   367 REKFIAAEMVDWHYDNstglngcsgaalende-------dasvflgepdasksriGSTYSKAVFKEYTDNTFteeverpq 439  Dunaliella salina
AAX88807   733 RTYYIKAEQVEWDYSPngfkhgcfaqnlke------------dsalwlqtgeysiGSKRQKLRFVEYTDDSFstqk---s 797  Dunaliella salina
AAX88807    28 RTYYISADEIDWKYGDgnkcfdglgpdgedv---------vpketidsmqdastiGGTYKKAQFRRYSANFKsrmer-dn 97   Dunaliella salina
YP_344595   58 RHYYIAAEERSWDFAPtnqdlihcsdrq----------------tpcslpepwtsSHIFPSVRYIEYTDETFtipk---p 118  Nitrosococcus oc...
Feature 1                                            # #                                       
NP_841583   91 qpeWMGILGPTIRAAVGDTIKIHFLNKTd----MPLSMHPHGVMydkdneg----------adggkggSIPPGERYTYTW 156  Nitrosomonas eur...
AAL78162   505 deqYLGLLGPVMRANVGDTIKVVLKNDAk----IDVSLHPHGVRyskanegtlye--dgtsgadkaddVVAPGTTYTYVW 578  Chlamydomonas re...
AAL78162   159 ewqHLGNVGPVMYGAVGQVIRVVFKNNLd----FPVNMAPSGGLiawdgng----------rrsaridPVKPGQTVTYLW 224  Chlamydomonas re...
AAL78162   869 tpaYYGTMGPMIIAEVGDRIVVHFKNAVtdleeYPLNISPGGGLlvegaa-------------dencaEVAAGETCVYRW 935  Chlamydomonas re...
AAX88807   440 edaYLGLLGPVLRAQVGDTLKVTFKNKLga-gmPPVSMHPHGVAyskdaegapyn---dgttnrraddAVAPGDTFTYMW 515  Dunaliella salina
AAX88807   798 apaYHGILGPLIAAEVNDTIKVVLKNDIei-dgENINFHLGGGFvelgd--------------tdtnkVVAPGETYTYRW 862  Dunaliella salina
AAX88807    98 tekHMGFLGALMRVEAGDTIKVVLRNNLp----FDINLSPSGGAswasgdey--------tmtagvtpVTKPGEIRSYSW 165  Dunaliella salina
YP_344595  119 qpeWLGILGPIIRAEVGDILKVHFCNQTa---tGTYSMHPHGLRytkdnegspyfganstdtlpgagaRIPPGECFDYTW 195  Nitrosococcus oc...
Feature 1                               # #                     
NP_841583  157 IVDQDAGPGp-----gDPSSIVWLYHSHVMaeEEVNLGLIGTLIITAAG 200  Nitrosomonas europaea ATCC 19718
AAL78162   579 NVPDRAGPGp-----cDPSSMLWMYHSHIDetAETYAGVAGGIIVTAKD 622  Chlamydomonas reinhardtii
AAL78162   225 QIPEDAGPVan----aTVTSRLWLYRSSVDpqKHDNAGLVGPIIVTSAA 269  Chlamydomonas reinhardtii
AAL78162   936 IVPDSSGPGt-----aDFNTAVYGYTSSVDvaTAPSAGLAGALVVAGRG 979  Chlamydomonas reinhardtii
AAX88807   516 HVTEAAGPGp-----kDPSSKLWMYHSHTDevRDTYAGLFGGILVYDKD 559  Dunaliella salina
AAX88807   863 MVPASAGPDss---keQLSSIPYTYASTVKwgPHQTAGLVGLALVTEKG 908  Dunaliella salina
AAX88807   166 NVPEDAAPVnpdatkgEQSSRLYIYRSTLDvfAHDNAGLIGPIIVTSKG 214  Dunaliella salina
YP_344595  196 ITDEGSGPGg-----gDPSSKVWWYHSHVDtpADTNAGLLGPIIITRYG 239  Nitrosococcus oceani ATCC 19707

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