3CDZ


Conserved Protein Domain Family
CuRO_5_FVIII_like

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cd04228: CuRO_5_FVIII_like 
Click on image for an interactive view with Cn3D
The fifth cupredoxin domain of coagulation factor VIII and similar proteins
Factor VIII functions in the factor X-activating complex of the intrinsic coagulation pathway. It facilitates blood clotting by acting as a cofactor for factor IXa. In the presence of Ca2+ and phospholipids, Factor VIII and IXa form a complex that converts factor X to the activated form Xa. A variety of mutations in the Factor VIII gene can cause hemophilia A, which typically requires replacement therapy with purified protein. Factor VIII is synthesized as a single polypeptide with six cupredoxin domains and a domain structure of 1-2-3-4-B-5-6-C1-C2, where 1-6 are cupredoxin domains, B is a domain with no known structural homologs and is dispensible for coagulant activity, and C are domains distantly related to discoidin protein-fold family members. Factor VIII is initially processed through proteolysis to generate a heterodimer consisting of a heavy chain (1-2-3-4) and a light chain (5-6-C1-C2), which circulates in a tight complex with von Willebrand factor (VWF). Further processing of the heavy chain produces activated factor VIIIa, a heterotrimer composed of polypeptides (1-2), (3-4), and the light chain. This model represents the cupredoxin domain 5 of unprocessed Factor VIII or the first cupredoxin domain of the light chain of circulating Factor VIII, and similar proteins.
Statistics
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PSSM-Id: 259890
Aligned: 5 rows
Threshold Bit Score: 322.221
Created: 4-Jun-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
homodimerDomain 6
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:homodimer interface [polypeptide binding site]
Evidence:
  • Structure:3CDZ; Human Factor VIII interface between heavy and light chains, contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
3CDZ_B         47 TRHYFIAAVERLWDYGMsssphvlr----nraqsgsvPQFKKVVFQEFTDgsFTQPLYRGElnEHLGLLGPYIRAEVEDN 122  human
AAO33367      742 IRQYFIAAMEVIWEYGNqrpqhflkatdptsgrrkpfRQYRKVIFREYLDgsFTQPAMRGEldEHLGILGPYIRAEIEDT 821  chicken
P00451       1714 TRHYFIAAVERLWDYGMsssphvlr----nraqsgsvPQFKKVVFQEFTDgsFTQPLYRGElnEHLGLLGPYIRAEVEDN 1789 human
XP_002187514 1425 IRQYFIAAVEVMWEYGDqrpqhflkamdprrsrrkhsWQYRKVVFREYLDdsFTQPVQRREldEHLGILGPYIRAEVQDV 1504 zebra finch
NP_001027922  992 YPHYYIAAEEVTWDYGVkkpyqlirpremsrgmrkflPQYKKVVYRAYKDesFRDPVSQGEleAHLGILGPFIKAEVNDL 1071 torafugu
Feature 1                        # #  ## #        ##                 #     ##   # #       ##      
3CDZ_B        123 IMVTFRNQASRPYSFYSSLISYEEdqrqgaepRKNFVKPNETKTYFWKVQHHMAPTkDEFDCKAWAYFSDVDLEKDVHSG 202  human
AAO33367      822 IMVKFKNLASRPFSFHSSLQGYEEl------hGGEAVQPGEVREYSWKVLSQMAPTmQEFDCKAWAYLSNVDLEKDLHSG 895  chicken
P00451       1790 IMVTFRNQASRPYSFYSSLISYEEdqrqgaepRKNFVKPNETKTYFWKVQHHMAPTkDEFDCKAWAYFSDVDLEKDVHSG 1869 human
XP_002187514 1505 IMVTFKNLASRPFSFHSTLTAYEGtt-----qQGGVVQPGGHQKYSWKVLHQMAPTtQEFDCKAWAYFSNVDLEKDLHSG 1579 zebra finch
NP_001027922 1072 LTVVFKNNASRPYSFHLHGVYDRNqga--sgvLGKPLAPGEVQTYNWRITKTQGPMdSEFDCKTGTYYSTVDKERDLNSG 1149 torafugu
Feature 1                    
3CDZ_B        203 LIGPLLVCHTN 213  human
AAO33367      896 LIGPLIICRRG 906  chicken
P00451       1870 LIGPLLVCHTN 1880 human
XP_002187514 1580 LIGPLIICKQG 1590 zebra finch
NP_001027922 1150 LIGPLVICKPG 1160 torafugu

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