Conserved Protein Domain Family
Rab26

?
cd04112: Rab26 
Rab GTPase family 26 (Rab26)
Rab26 subfamily. First identified in rat pancreatic acinar cells, Rab26 is believed to play a role in recruiting mature granules to the plasma membrane upon beta-adrenergic stimulation. Rab26 belongs to the Rab functional group III, which are considered key regulators of intracellular vesicle transport during exocytosis. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide dissociation inhibitors (GDIs), which facilitate Rab recycling by masking C-terminal lipid binding and promoting cytosolic localization. Most Rab GTPases contain a lipid modification site at the C-terminus, with sequence motifs CC, CXC, or CCX. Lipid binding is essential for membrane attachment, a key feature of most Rab proteins.
Statistics
?
PSSM-Id: 206695
Aligned: 4 rows
Threshold Bit Score: 290.999
Created: 9-Aug-2005
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
  next features
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Comment:Based on sequence similarity with other Rab isoforms.
  • Comment:The active conformation of Rab is stabilized by interations between the gamma phosphate of GTP and two critically conserved residues, Thr in switch I and Gly in switch II

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                #######         #                                                       
AAH40547      23 HKTILVGDSGVGKTSLLVQFDQGKFIpg---------------------------------------------------- 50  human
NP_649303    191 HKTILLGDSGVGKTSFLVKYNTGEFRlg---------------------------------------------------- 218 fruit fly
NP_001017715  36 FKVMLLGDSAVGKTCVLVRFKDGAFLgg---------------------------------------------------- 63  zebrafish
CAG00188      61 FKVMLVGDSGVGKTCLLVRFKDAAFLagsfistvgidfrggcggrngevlflgedglrspsvgsseasseehheyltahe 140 Tetraodon nigro...
Feature 1                                             ##                         #               
AAH40547      51 ----------------------------------sfSATVGIGFTNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDA 96  human
NP_649303    219 ----------------------------------sfSATVGIALTNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDA 264 fruit fly
NP_001017715  64 ----------------------------------nfIATVGIDFRNKVVTVDNMKVKLQIWDTAGQERFRSVTHAYYRDA 109 zebrafish
CAG00188     141 rggtsisgsgeeesmfggeeeeersaalgpsgehrfILDLQSQGENKVLTVDGVKVKLQIWDTAGQERFRSVTHAYYRDA 220 Tetraodon nigro...
Feature 1                                                 ## #                           ###     
AAH40547      97 QALLLLYDITNKSSFDNIRA--WLTEIHEYAQRDVVIMLLGNKADMss-eRVIRSEDGETLAREYGVPFLETSAKTGMNV 173 human
NP_649303    265 HALLLLYDVTNKTTYDNIRA--WLGEIREYAQEDVVIVLIGNKADCsgseRQVKREDGERLGREHNVPFMETSAKTGLNV 342 fruit fly
NP_001017715 110 QALLLLYDITRKSSFDNIRA--WLTEIYEYAQKDVVIMLLGNKSDMaa-eRVITHEEGEKLAKEYGVPFMETSAKTGVNV 186 zebrafish
CAG00188     221 HALLLLYDVTNKASFDNIQVsfVLFFSLTVGSSEQRLSVRADAAQE----RVVKREDGERLAKEFGVPFMETSARSGLNV 296 Tetraodon nigro...
Feature 1                                                   
AAH40547     174 ELAFLAIAKELKYraghqadeps---fqirdyvesqKKRSSCC 213 human
NP_649303    343 ELSFTAVARQLKSrgyehgddgkfnvhdfvrdntkaRSVCAQC 385 fruit fly
NP_001017715 187 ELAFHAIARELKHrnleqphepk---fkihdyiesqKQKSNCC 226 zebrafish
CAG00188     297 DLAFTAVAKELKHrsvqdpsetf----klqeyvnkeMKSSGCC 335 Tetraodon nigroviridis

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap