Conserved Protein Domain Family
MATH_Ubp21p

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cd03775: MATH_Ubp21p 
Ubiquitin-specific protease 21 (Ubp21p) family, MATH domain; composed of fungal proteins with similarity to Ubp21p of fission yeast. Ubp21p is a deubiquitinating enzyme that may be involved in the regulation of the protein kinase Prp4p, which controls the formation of active spliceosomes. Members of this family are similar to human HAUSP (Herpesvirus-associated ubiquitin-specific protease) in that they contain an N-terminal MATH domain and a C-terminal catalytic protease (C19 family) domain. HAUSP is also an ubiquitin-specific protease that specifically catalyzes the deubiquitylation of p53 and MDM2. The MATH domain of HAUSP contains the binding site for p53 and MDM2. Similarly, the MATH domain of members in this family may be involved in substrate binding.
Statistics
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PSSM-Id: 239744
Aligned: 10 rows
Threshold Bit Score: 214.528
Created: 15-May-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative substrate binding site [chemical binding site]
Evidence:
  • Comment:Based on the substrate binding site of TRAFs and HAUSP. The binding site residues involved in the binding of TRAFs to TNFRs and of HAUSP to p53/MDM2 partially overlap, but are not conserved. The substrate binding pocket located in the MATH domain for members of this superfamily may be in the same location, but the specific interactions are different.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                         #                            
Q9UTT1      52 ASYSWVVKNFst--leDKTYSPLFKAGhTTWRIVLFPKGCnq---teYASVFLEYLPQckveairkyeaelaagktptid 126  fission yeast
Q09879      56 QRFTWHIKSWhe--ldRRAVSPQFAVGsRQFKITYFPQGTlqs--agFTSIFLEYIPSeeek------------------ 113  fission yeast
AAW45153    50 QYQTWRIEHWsq--qpKRIVGPEFSCGgHKWRILLFPQGNangqpndMVSVYLDYANPkta------------------- 108  Cryptococcus neo...
CAD11412   103 QVYTWEIKGWrn--lnKKEHGPIFHAGgFPWRILLFPYGNnv----dQCSIYLEHGFEade------------------- 157  Neurospora crassa
AAS54134    36 GRFTWRIERWsel-rgEKHYSPRVQVGrWEWDLLVFPHGNst----kGIAMYLAPHPVqa-------------------- 90   Ashbya gossypii ...
XP_452824   36 GSFTWRIDNWyel-tnDKYHSGKYKFDgLEWDLLIFPQGNhs----rGVSIYLAPHPDpelvsv---------------- 94   Kluyveromyces la...
XP_502896   71 FDFTWEISDWta--lpKRVHSDPFVHNgVRYRLLLFPQGKsq----gEVSLFLEAAPDvsdga----------------- 127  Yarrowia lipolyt...
NP_014033   40 DSFTWNIPDWnel-tnPKYNSPRFRIGdFEWDILLFPQGNhn----kGVAVYLEPHPEekldettg-------------- 100  baker's yeast
XP_714422  179 TYYVWEIKDWaqllkeEKVRSPKFKCGgFEWNILLFPRGNsq---nnSLSIYMEPHPPvdend----------------- 238  Candida albicans...
EAS31059    67 THHTWHIQNWtr--meRKEHGPIFECGgSPWRVLFFPFGNqv---teYASFYLEHGYEeap------------------- 122  Coccidioides imm...
Feature 1                                                  ###                                 
Q9UTT1     127 peivndeTYSCCAQFALSLSNVq-DPTVMQINTSHHRFRs-eVKDWGFTRFVDLRKIAVPtpe----fpvPFLENDEICI 200  fission yeast
Q09879     114 ----lsnKYGCCCQFAFVISNPr-KPSLSVANSAHCRFSp-eIVDWGFTQFAELKKLLCRqap----dvpPIVEDGALLL 183  fission yeast
AAW45153   109 -----peGWHACAQFCLAISNPw-DPTIQTSSHAHHRFVa-eECDWGFTRFVDLRKLYTAdpan--gknrPTIENDEVEI 179  Cryptococcus neo...
CAD11412   158 ----mpeKWSCCVQFALVLWNPn-DPSVFHHHSAHHRFTk-eESDWGFTRFLELRRLFSQpydg---ssrPLGENESVNI 228  Neurospora crassa
AAS54134    91 -----eaDWYVCAQFAIVLSRPgdDARTQLVSRSQHRFNa-vDKDWGFSNLIELEHLRFAtrg----rpsGFLSGDQLNV 160  Ashbya gossypii ...
XP_452824   95 --dndntDWHVCAQFAIVFSKPgeDANVQLSNKASHRFTa-tDKDWGFSNFIEVDYLKHYsrn----kpsGFLNQGAVNI 167  Kluyveromyces la...
XP_502896  128 ---rvdpDWAVCVQFSLVMWNPn-APYIFQNMVAHHRFDaedGGDWGFSRFYDLRRLAARhld----tqhALLERNVMNI 199  Yarrowia lipolyt...
NP_014033  101 emvpvdpDWYCCAQFAIGISRPgnGDTINLINKSHHRFNa-lDTDWGFANLIDLNNLKHPskg----rplSFLNEGTLNI 175  baker's yeast
XP_714422  239 --kpldeNWYVCAQFGLDIWNPa-HPDAHLPNQSHHRFTk-nETDWGFSSLIELRQLEQVnnprnqssmyAILENNKLNI 314  Candida albicans...
EAS31059   123 -----peGWSRCVQFALVLWSKn-NPSIYVSHVATHRFNa-sDGDWGFTRFCELRKLFHGpfde---ngsPLIENEEACL 192  Coccidioides imm...
Feature 1           
Q9UTT1     201 SVTVR 205  fission yeast
Q09879     184 TAYVR 188  fission yeast
AAW45153   180 TAFVR 184  Cryptococcus neoformans var. neoformans JEC21
CAD11412   229 SAYVR 233  Neurospora crassa
AAS54134   161 TVYVR 165  Ashbya gossypii ATCC 10895
XP_452824  168 SVFIR 172  Kluyveromyces lactis NRRL Y-1140
XP_502896  200 TVVGR 204  Yarrowia lipolytica CLIB122
NP_014033  176 TAYVR 180  baker's yeast
XP_714422  315 TGFVR 319  Candida albicans SC5314
EAS31059   193 TVYMR 197  Coccidioides immitis RS

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