Conserved Protein Domain Family
MATH_Meprin

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cd03771: MATH_Meprin 
Meprin family, MATH domain; Meprins are multidomain, highly glycosylated extracellular metalloproteases, which are either anchored to the membrane or secreted into extracellular spaces. They are expressed in renal and intestinal brush border membranes, leukocytes, and cancer cells, and are capable of cleaving growth factors, cytokines, extracellular matrix proteins, and biologically active peptides. Meprin proteases are composed of two related subunits, alpha and beta, which form homo- or hetro-complexes where the basic unit is a disulfide-linked dimer. Despite their similarity, the two subunits differ in their ability to self-associate, in proteolytic processing during biosynthesis and in substrate specificity. Both subunits are synthesized as membrane spanning proteins, however, the alpha subunit is cleaved during biosynthesis and loses its transmembrane domain. Meprin beta forms homodimers or heterotetramers while meprin alpha oligomerizes into large complexes containing 10-100 subunits. Both alpha and beta subunits contain a catalytic astacin (M12 family) protease domain followed by the adhesion or interaction domains MAM, MATH and AM. The MATH and MAM domains provide symmetrical intersubunit disulfide bonds necessary for the dimerization of meprin subunits. The MATH domain may also be required for folding of an activable zymogen.
Statistics
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PSSM-Id: 239740
Aligned: 11 rows
Threshold Bit Score: 260.024
Created: 15-May-2006
Updated: 17-Jan-2013
Structure
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Aligned Rows:
 
putative
Feature 1:putative substrate binding site [chemical binding site]
Evidence:
  • Comment:Based on the substrate binding site of TRAFs and HAUSP. The binding site residues involved in the binding of TRAFs to TNFRs and of HAUSP to p53/MDM2 partially overlap, but are not conserved. The substrate binding pocket located in the MATH domain for members of this superfamily may be in the same location, but the specific interactions are different.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #                    
2499910   431 CPTGVWTVRNFsqvle--ntskGDKLQSPRFYNSeGYGFGVTLYPNSres---sgYLRLAFHVCSGENDAILEWPVENRQ 505  human
CAF95506  364 CPDFTMQFDHFealiq--tskiNTAIYSPRLYSPgGYAYRVGILLQAp-------SFALFVQLLSGENDERLEWPCPRRQ 434  Tetraodon nigrovi...
NP_005916 427 CPHHIWHIRNFtqfi----gspNGTLYSPPFYSSkGYAFQIYLNLAHv------tNAGIYFHLISGANDDQLQWPCPWQQ 496  human
XP_419181 403 CPHHVWHIRNFtdllntspagtAGRIYSPPFYSStGYAFQVGLYVNGttd--npfNLAIYLHLISGANDDQLQWPCAWQQ 480  chicken
CAG01597  365 CPEHVWHVRNItglla--ttpaGRKAYSPRFLSStGYSFQVGVYLNGvss--rpgYMAVYLHLTSGPNDHKLRWPCPWHQ 440  Tetraodon nigrovi...
CAF91596  401 CPEFIWRVKNFtqvme--ntpnNQSIFSPPFKSKeGYTFQMQLYPNGtdk--ypgQLGAFAHLVAREGDTGQEWPCPWKQ 476  Tetraodon nigrovi...
XP_698972 430 CPQHSWRIRDFtklla--ttapGSKIYSPRLLSPdGYSFQIGLYINGlkd--spdKMAIYLHLTSGPHDDNLQWPCPWRQ 505  zebrafish
AAH79789  431 CPNAVWQVRDFsqile--sttkGDRFMSNCFTSPeGYGYAVSIYPHGqesspyvnYTGISFHMCSGEDDDVMEWPALNRQ 508  African clawed frog
XP_420065 438 CPTAVWVVRNFsqil---engsTAVIQSPRFYSPeGYAYGISLYPQSns----ngYTRVAFHLCSGENDAVLEWPALNRQ 510  chicken
XP_695419 419 CPAAVWRIQNFssile--kadySTVLNSPRFYSPeGYGFGIQVIPLSgysdyagnYTGLYFHLISGDNDIVMQWPAVNRQ 496  zebrafish
CAG12999  447 CPNAVWRIQNFskime--tatrHTVLHSPRFYSPeGYGYGVRLVPLSnytdytgnYTGLYFHLASGENDAVLQWPAINRQ 524  Tetraodon nigrovi...
Feature 1                                                                    ###              
2499910   506 VIITILDQEPDVRNRMSSSMVFTTSKSHTSpa--inDTVIWDRPSRVGtyhtd---cncfRSIDLGWSGFISHQMLKRRS 580  human
CAF95506  435 VTSTMLDQSSNIQQHMSKQRSFTSDLSTSTv----nGSYLWDNPRKIGnpftdknnetiyGGPWLSFGHFSSLTEIRERE 510  Tetraodon nigrovi...
NP_005916 497 ATMTLLDQNPDIRQRMSNQRSITTDPFMTTd----nGNYFWDRPSKVGtvalfsngtqfrRGGGYGTSAFITHERLKSRD 572  human
XP_419181 481 VTMILLDQHPDIRQRMSNQRSVTTDPLELSgs---sSNYFWDRPDKVGsaasfpngtmfmRGPGRGTNAFLTHQRLRSRD 557  chicken
CAG01597  441 GTMALLDQQSDIRQQMSMHRMVTTDPKMISsd---gTEFYWDDPRKVGskitasdgsfyyRGPGYGTSTFIAHSRLRSRN 517  Tetraodon nigrovi...
CAF91596  477 MTMMLMDQHPHIQKRMSNQRSVTTDPNMTAtd---sDQFFWDDPRKVGievkdtdgstyfRGPGAGTAVYLTHLRARSRD 553  Tetraodon nigrovi...
XP_698972 506 ASMEMMDQNPDIQRRMNNIRMITTDPDKTStdssgnVEYFWDDPRKVGsrvtdtdgstfyRGSGYGTSSFITHDRLKSRS 585  zebrafish
AAH79789  509 AIITILDQDPNVQLRMSSSRSFTTLSSQVIes--mnNISRWERPSLIGkydvt---cdcyRTLDFGWSTFISHSQLHRRS 583  African clawed frog
XP_420065 511 AMLTVLDQDPDVLKRMSASRSFTTNRDQTSsv---nGTLLWERPSINGkfdas---cncyRTRDWGWNNFISHSQLRRRS 584  chicken
XP_695419 497 ATIVVMDQDPDIRLRMSSARSLTTDLSKASsa--lnADMRWNKPSTFEqwdds---clcfRGPEFGWGTFISHDQLRRRD 571  zebrafish
CAG12999  525 ATLVVMDQDPDIKLRMSTARSLTTDMRTSD------GKLLWDDPSKVGtydps---cdchRGVSWGWRNFVKHFDLRRRN 595  Tetraodon nigrovi...
Feature 1                   
2499910   581 FLKNDDLIIFVDFE 594  human
CAF95506  511 FVKGGSTVFTFKFD 524  Tetraodon nigroviridis
NP_005916 573 FIKGDDVYILLTVE 586  human
XP_419181 558 FIKEGGVYILLTME 571  chicken
CAG01597  518 FLKGDDAFFLLSFE 531  Tetraodon nigroviridis
CAF91596  554 FIKGGDAIFLLTME 567  Tetraodon nigroviridis
XP_698972 586 FIKGDDVIFLLSLE 599  zebrafish
AAH79789  584 FLKNDNLILFVDFE 597  African clawed frog
XP_420065 585 FLKNDNLIIFAEFH 598  chicken
XP_695419 572 FLKNDDLIITINFD 585  zebrafish
CAG12999  596 YLKNDDLIIFIDFE 609  Tetraodon nigroviridis

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