1KEH,1AJQ,1CP9,1KEC,1OQZ


Conserved Protein Domain Family
Ntn_PGA_like

?
cd03747: Ntn_PGA_like 
Click on image for an interactive view with Cn3D
Penicillin G acylase (PGA) belongs to a family of beta-lactam acylases that includes cephalosporin acylase (CA) and aculeacin A acylase. PGA and CA are crucial for the production of backbone chemicals like 6-aminopenicillanic acid and 7-aminocephalosporanic acid (7-ACA), which can be used to synthesize semi-synthetic penicillins and cephalosporins, respectively. While both PGA and CA have a conserved Ntn (N-terminal nucleophile) hydrolase fold and the structural similarity at their active sites is very high, their sequence similarity is low.
Statistics
?
PSSM-Id: 239716
Aligned: 111 rows
Threshold Bit Score: 229.054
Created: 25-Apr-2006
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
active site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1AJQ_B; Providencia rettgeri penicillin G acylase binds thiopheneacetic acid

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1     #                      #                                 #           # #        
1KEH_A    170 ANSWAVApgktangNALLLQNPHLSWttdyftyyeahlvtpdfeiyGATQIGLPvIRFAFNQRMGITNTVNGMVGATNYR 249 Brevundimonas dimi...
1AJQ_B      1 SNMWVIGkskaqdaKAIMVNGPQFGWyapaytygig-lhgagydvtGNTPFAYPgLVFGHNGVISWGSTAGFGDDVDIFA 79  Escherichia coli
1CP9_B      1 SNVWLVGktkasgaKAILLNGPQFGWfnpaytygig-lhgagfnivGNTPFAYPaILFGHNGHVSWGSTAGFGDGVDIFA 79  Providencia rettgeri
1KEC_B      1 SNMWVIGkskaqdaKAIMVNGPQFGWyapaytygig-lhgagydvtGNTPFAYPgLVFGHNGVISWGSTAGFGDDVDIFA 79  Escherichia coli
P31956    266 SNAAIVGseksatgNALLFSGPQVGFvapgflyevg-lhapgfdmeGSGFIGYPfIMFGANNHFALSATAGYGNVTDIFE 344 Arthrobacter viscosus
AAB71221  266 SNLWSTRpervqegSTVLINGPQFGWynpaytygig-lhgagfdvvGNTPFAYPiVLFGTNSEIAWGATAGPQDVVDIYQ 344 Alcaligenes faecalis
AAL58441  266 SNLWSTRpervqdgSTVLINGPQFGWynpaytygig-lhgagfdvvGNTPFAYPiVLFGTNSEIAWGATAGPQDVVDMYQ 344 Alcaligenes faecalis
AAP20806  287 SNMWIVGrdhakdaRSILLNGPQFGWwnpaytygig-lhgagfdvvGNTPFAYPsILFGHNAHVAWGSTAGFGDDVDIYA 365 Achromobacter xylo...
AAS87335  320 SNMWIVGrehakdaRSILLNGPQFGWwnpaytygig-lhgagydvvGNTPFAYPsILFGHNAHVTWGSTAGFGDDVDIYA 398 uncultured gamma p...
AAY25991  307 SNMWIVGrdhakdaRSILLNGPQFGWwnpaytygig-lhgagfdvvGNTPFAYPsILFGHNAHVTWGSTAGFGDDVDIFA 385 Achromobacter sp. ...
Feature 1                                                                                   # 
1KEH_A    250 LTLqd---ggYLYDGQVRPferrqasyrlrqadgstvdkpleIRSSVHGPVferadgtavav---rvagldrpgmLEQYF 323 Brevundimonas dimi...
1AJQ_B     80 ERLsaekpgyYLHNGKWVKmlsreetitv----kngqaetftVWRTVHGNIlqtdqttqtayaksrawdgkevasLLAWT 155 Escherichia coli
1CP9_B     80 EQVspedpnsYLHQGQWKKmlsrqetlnv----kgeqpitfeIYRTVHGNVvkrdktthtayskarawdgkeltsLMAWV 155 Providencia rettgeri
1KEC_B     80 ERLsaekpgyYLHNGKWVKmlsreetitv----kngqaetftVWRTVHGNIlqtdqttqtayaksrawdgkelasLLAWT 155 Escherichia coli
P31956    345 EKLntknssqYLYKGKWRDmekrkesftvkgdngekktvekiYYRTVHGPVisrdetnkvayskyvsfrgteaqsMSAYM 424 Arthrobacter viscosus
AAB71221  345 EKLnpsradqYWFNNAWRTmeqrkeriqv----rgqadremtIWRTVHGPVmqfdydqgaayskkrswdgyevqsLLAWL 420 Alcaligenes faecalis
AAL58441  345 ERLnparadqYWFNNAWRTmeqrkeriqv----rgqadremtIWRTVHGPVmqfdydqgtayskkrswdgyevqsLLAWL 420 Alcaligenes faecalis
AAP20806  366 EKLdpadrnrYFHDGQWKTlekrtdlilv----kdaapvtldVYRSVHGLIvkfddaqhvayakarawegfelqsLMAWT 441 Achromobacter xylo...
AAS87335  399 EKLdpadrtrYFHNGEWKTmekrteliqv----kdgkpvlmdVYRTVHGIVtkfddkqhvayakarawegfelqsLMAWT 474 uncultured gamma p...
AAY25991  386 EKLdpadrtrYFHDGQWKTlekrtdlilv----kdaapvtldVYRSVHGLIvkfddaqhvayakarawegyelqsLMAWT 461 Achromobacter sp. ...
Feature 1                           #                                                         
1KEH_A    324 DMITAHSFDDYEAAMARMqvptFNIVYADregTINYSFNgvapkraegdiafwqgnvpgdsSRYLWTETHplddLPRVTn 403 Brevundimonas dimi...
1AJQ_B    156 HQMKAKNWQQWTQQAAKQal-tINWYYADvngNIGYVHTgaypdrqsgh---dprlpvpgtGKWDWKGLLpfemNPKVYn 231 Escherichia coli
1CP9_B    156 KQGQAQNWQQWLDQAQNQal-tINWYYADkdgNIGYVHTghypdrqinh---dprlpvsgtGEWDWKGIQpfanNPKVYn 231 Providencia rettgeri
1KEC_B    156 HQMKAKNWQEWTQQAAKQal-tINWYYADvngNIGYVHTgaypdrqsgh---dprlpvpgtGKWDWKGLLpfemNPKVYn 231 Escherichia coli
P31956    425 KANWAKNLKEFENAASEYtm-sLNWYYADkkgDIAYYHVgrypvrnnki---deriptpgtGEYEWKGFIpfkeNPHVIn 500 Arthrobacter viscosus
AAB71221  421 NVAKARNWTEFLDQASKMai-sINWYYADkhgNIGYVSPaflpqrpadq---dirvpakgdGSMEWLGIKsfdaIPKAYn 496 Alcaligenes faecalis
AAL58441  421 NVAKARNWTEFLDQASKMai-sINWYYADkygNIGYVSPaflpqrpadq---dirmpakgdGSMEWLGIKsfdaIPKAYn 496 Alcaligenes faecalis
AAP20806  442 RKTQSANWEQWKTQAARHal-tINWYYADdrgNIGYAHTgfyprrrpgh---dprlpvpgtGEMDWLGLLpfstNPQVYn 517 Achromobacter xylo...
AAS87335  475 HKTQARNWDQWKQQAARHal-tINWYYADdrgNIGYAHTgfypkrkpgh---dprlpvpgtGEMDWDGMLpfatNPQVYn 550 uncultured gamma p...
AAY25991  462 RKTQSANWEQWKAQAARHal-tINWYYADdrgNIGYAHTgfyprrrpgh---dprlpvpgtGEMDWLGLLpfstNPQVYn 537 Achromobacter sp. ...
Feature 1              #                                                                      
1KEH_A    404 ppggFVQNSNDPPwtptwpvtycpanhpsylapqtphslRAQQSVRLMSEnd----dlTLERFMALQFShravmadrtlp 479 Brevundimonas dimi...
1AJQ_B    232 pqsgYIANWNNSPqkdypasdl--------faflwggadRVTEIDRLLEQkp----rlTADQAWDVIRQtsrqdlnlrlf 299 Escherichia coli
1CP9_B    232 pksgYIANWNNSPaknypasdl--------faflwgsadRVKEIDNRIEAyd----klTADDMWAILQQtsrvdlnhrlf 299 Providencia rettgeri
1KEC_B    232 pqsgYIANWNNSPqkdypasdl--------faflwggadRVTEIDRLLEQkp----rlTADQAWDVIRQtsrqdlnlrlf 299 Escherichia coli
P31956    501 pkngYVVNWNNKPskewvngey---------syywgednRVQQYINGMEArg----kvTLEDINEINYTasfaqlranlf 567 Arthrobacter viscosus
AAB71221  497 ppqgYLVNWNNKPapdktntd----------tyywtygdRMNELVSQYQQkd----lfSVQEIWEFNQKasysdvnwryf 562 Alcaligenes faecalis
AAL58441  497 ppqgYLVNWNNKPapdktntd----------tyywtygdRMNELVSQYQQkd----vfSVQEIWTFNKKasysdvnwryf 562 Alcaligenes faecalis
AAP20806  518 pgqgFIANWNNQPmrgypstdl--------faivwgqadRYAEIETRLKAmtanggkvSPQQMWDLIRTtsyadvnrrhf 589 Achromobacter xylo...
AAS87335  551 prqgYIANWNNQPmrgypstdl--------faivwgqadRYAEIETRMKAmtadggkiSAQQMWDLIRTtsyadvnrrhf 622 uncultured gamma p...
AAY25991  538 prqgFIANWNNQPmrgypstdl--------faivwgqadRYAEIETRLKAmtanggkvSAQQMWDLIRTtsyadvnrrhf 609 Achromobacter sp. ...
Feature 1                                                                                     
1KEH_A    480 dlipaalidpdpevqaaarllaawdrdftsdsraallfeewarlfagqnfagqaafatpwsldkpvst------------ 547 Brevundimonas dimi...
1AJQ_B    300 lptlqaatsgltqsdprrqlvetltrwdginllnddgktwqqpgsailnvwltsmlkrtvvaavpmpfdkwysasgyett 379 Escherichia coli
1CP9_B    300 tpfltqatqglpsndnsvklvsmlqqwdginqlssdgkhyihpgsaildiwlkemlkatlgqtvpapfdkwylasgyett 379 Providencia rettgeri
1KEC_B    300 lptlqaatsgltqsdprrqlvetltrwdginllnddgktwqqpgsailnvwltsmlkrtvvaavpmpfdkwysasgyett 379 Escherichia coli
P31956    568 kpllidvldknkstngnytyliekleewnnlkedenkdgyydagiaaffdewwnnlhdklfmdelgdfygitkeitd--- 644 Arthrobacter viscosus
AAB71221  563 rphleklaqqlpaddsskaaltmllawdgmeqdqggqnagparvlfktwleemykqvlmpvvpeshramysqtgfatqqg 642 Alcaligenes faecalis
AAL58441  563 rphleklaqslpandgsqaalttllawdgmerdqdghnvgparvlfktwleemykqvlmpvvpeshramysqagfatqqg 642 Alcaligenes faecalis
AAP20806  590 lpflqravqglpaddprvrlvaglggwdgmmtserepgyydnagpavmdawlramlkrtladempadffkwysatgyptp 669 Achromobacter xylo...
AAS87335  623 lpflqravaglpaddararlvadlstwdgmgtsdkqpgyydnagsavmdawlramlrstladempadffkwysatgyptp 702 uncultured gamma p...
AAY25991  610 lpflqravqglpaddprvrlvaglaawdgmmtserqpgyfdnagpavmdawlramlrrtladempadffkwysatgyptp 689 Achromobacter sp. ...
Feature 1                                                                                     
1KEH_A    548 ------------------------pygvrdpkaavdqlrtaiantkrkygaidrpfgdasrmilndvnvpgaagygnlgs 603 Brevundimonas dimi...
1AJQ_B    380 qdgptgslnisvgakilyeavqgdkspipqavdlfagkpqqevvlaaledtwetlskrygnnvsnwktpamaltfrannf 459 Escherichia coli
1CP9_B    380 qegptgslnistgakllyeslledkspisqsidlfsgqpqndvirktlnttyqkmiekygdnpanwqtpataltfrennf 459 Providencia rettgeri
1KEC_B    380 qdgptgslnisvgakilyeavqgdkspipqavdlfagkpqqevvlaaledtwetlskrygnnvsnwktpamaltfrannf 459 Escherichia coli
P31956    645 --------------hrygaslaykniskestnykwvnvdqekiimestnevlaklqsekglkaekwrmpiktmtfgeksl 710 Arthrobacter viscosus
AAB71221  643 pnpgs--inlsmgtkvllralvleahpdpkrvnvfgerssqeimhtalqnaqarlsqeqgaqmarwtmptsvhrfsdknf 720 Alcaligenes faecalis
AAL58441  643 pnpgs--inlsmgtkvllralaleanpdpkrvnifgersspeimhtalqnaqarlsqeqgaqmerwtmptsvhrfsdknf 720 Alcaligenes faecalis
AAP20806  670 qapatgslnlttgvkvlfnalagpaagvpqrydffngaraddvilaalddalaalrqaygkdpaawkipappmvfapknf 749 Achromobacter xylo...
AAS87335  703 atpatgslnltvgvkvlfnalagpnagvpqpydffngkrpeavslaaldealaalqkaygqdpaawripappmvfapknf 782 uncultured gamma p...
AAY25991  690 qapatgslnlttgvkvlfnalagpeagvpqrydffngaraddvilaalddalaalrqaygqdpaawkipappmvfapknf 769 Achromobacter sp. ...
Feature 1                                                      
1KEH_A    604 frvftwsdpdengirtpvhgetWVAMIEFst-----pVRAYGLMSYGNS 647 Brevundimonas diminuta
1AJQ_B    460 fgvpqaaaeetrhqaeyqnrgtENDMIVFspttsdrpVLAWDVVAPGQS 508 Escherichia coli
1CP9_B    460 fgipqalpqenfhqneyhnrgtENDLIVFte----egVSAWDVVAPGQS 504 Providencia rettgeri
1KEC_B    460 fgvpqaaaeetrhqaeyqnrgtENDMIVFspttsdrpVLAWDVVAPGQS 508 Escherichia coli
P31956    711 igiphgygsmtpiiemnrgsenHYIEMTPk------gPSGFNITPPGQI 753 Arthrobacter viscosus
AAB71221  721 tgtpqtmpgntfaftgyqnrgtENNRVVFda----kgVEFCDAMPPGQS 765 Alcaligenes faecalis
AAL58441  721 tgtpqttlgntfaftgyqnrgtENNRVVFdt----qgVEFCDAMPPGQS 765 Alcaligenes faecalis
AAP20806  750 lgvpqadakavlsypatqnrgtENNMTVFdg----ksVRAVDVVAPGQS 794 Achromobacter xylosoxidans
AAS87335  783 lgvpqaddkavlsfsatqnrgtENNMTVFdg----kgVRAVDVVAPGQS 827 uncultured gamma proteobacterium
AAY25991  770 lgvpqadakavlcyratqnrgtENNMTVFdg----ksVRAVDVVAPGQS 814 Achromobacter sp. CCM 4824

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap