Conserved Protein Domain Family
SOCS_WSB2_SWIP2

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cd03745: SOCS_WSB2_SWIP2 
SOCS (suppressors of cytokine signaling) box of WSB2/SWiP2-like proteins. This family consists of WSB-2 (SOCS-box-containing WD-40 protein) and SWiP-2 (SOCS box and WD-repeats in Protein). No functional information is available for WSB2 or SWiP-2, but limited information is available for the isoforms WSB-1 and SWiP-1. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.
Statistics
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PSSM-Id: 239714
Aligned: 5 rows
Threshold Bit Score: 76.0873
Created: 2-May-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative elongin B/C interaction [polypeptide binding site]
Evidence:
  • Comment:based on the homology to the human SOC2 complex

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1      ######     #      #     #    #        
BAE29788  274 RVLSSLKHLCRKALRSFLTTYQVLALPIPKKMKEFLTYR 312 house mouse
AAH82668  368 KVLPSLRHLCRKALRCFLTTYQVLALPIPGKMKDFLTYR 406 African clawed frog
XP_415313 180 RVLSSLKHLCRKALRTFLTTYQVLALPIPRKLKEFLTYR 218 chicken
AAF80478  364 RVLSSLKHLCRKALRSFLTTYQVLALPIPKKMKEFLTYR 402 human
CAG08162  380 LTVPSLRHLCRSILRHSVSTHQIEPLPLPKRIVEYLTYR 418 Tetraodon nigroviridis

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