4ZCM,4ZCI


Conserved Protein Domain Family
BipA_TypA_II

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cd03691: BipA_TypA_II 
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Domain II of BipA
BipA (also called TypA) is a highly conserved protein with global regulatory properties in Escherichia coli. BipA is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways. BipA functions as a translation factor that is required specifically for the expression of the transcriptional modulator Fis. BipA binds to ribosomes at a site that coincides with that of EF-G and has a GTPase activity that is sensitive to high GDP:GTP ratios and is stimulated by 70S ribosomes programmed with mRNA and aminoacylated tRNAs. The growth rate-dependent induction of BipA allows the efficient expression of Fis, thereby modulating a range of downstream processes, including DNA metabolism and type III secretion. The domain II of BipA shows similarity to the domain II of the elongation factors (EFs) EF-G and EF-Tu.
Statistics
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PSSM-Id: 293892
Aligned: 34 rows
Threshold Bit Score: 96.1025
Created: 23-Aug-2004
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4ZCM_A    239 FQMQISQLDYNs-YVGVIGIGRIKRGKVKPNQQVTIIDs----eGKTRNAKVGKVLGHl-GLERIETDLAEAGDIVAITG 312 Escherichia coli K-12
NP_851035 282 LQMLATNIEYDe-HKGRIAIGRLHAGVLRKGMDVRVCTs----eDSCRFARVSELFVYe-KFYRVPTDSVEAGDICAVCG 355 thale cress
CAA14725  207 FSMLVTTREYNp-FFGRVLTGRVQSGTLKINQNVQVLNhe---nKVLETGRITKILAFr-GLERIAIDNAKAGDIIAVAG 281 Rickettsia prowazekii
AAW60413  203 FGMVSTILESDn-FLGRILTGRIDQGRAKVNMPVRVLRpd---gTVVETGRLTKLLSFr-GLDRVPVEEAEAGDIVAVAG 277 Gluconobacter oxyd...
AAZ20987  205 FAMLSTLLYADs-FLGRSLVGKISQGTAKANQAIKAINlk---gEKVDEGRLTKIFRYe-GTKKVPIEVGEAGDIVVIAG 279 Candidatus Pelagib...
AAC63846  259 FLMLVSMMEKDf-YLGRILTGRVTSGVVRVGDRVNGLRktdsgsEKIEEAKVVKLMKKk-GTTIVSIDAAGAGDIICMAG 336 thale cress
XP_643254 312 FTMLVTNLESDp-FVGRIVTGKIYSGKAKVGQPLRVVDmk--gnVIEDGSKITKIFCRr-AMERIVLEEGEAGDIVGIAG 387 Dictyostelium disc...
YP_444610 239 LQVLVTSVQRDd-YLGPVAIGRVEQGVLQDRQDVTLCHr----dGSTEQAEVTALFEYe-GLQREETDAAGPGQIVAIAG 312 Salinibacter ruber...
AAK22726  209 FQILSVLIESDp-FLGRLLTGRIESGKAVPGMAIKALDrd---gKEIERGRITKVLAFrgLKRQPIDDGAEAGDIVAIAG 284 Caulobacter cresce...
CAJ04427  223 LQMLVAQVDEDekNNTKLAIGRIYNGTVQTGDVVTVALe-----DKQTDALVKSIHLYc-GVQKMPVTSASYGDICILEL 296 Leishmania major
4ZCM_A    313 LgelNISDTVCDtQNVEALP 332 Escherichia coli K-12
NP_851035 356 IdniQIGETIADkVHGKPLP 375 thale cress
CAA14725  282 VenaNVSDTICApEVTKAIP 301 Rickettsia prowazekii
AAW60413  278 LseaTIPDTIADpSVEEPLP 297 Gluconobacter oxydans 621H
AAZ20987  280 LekaNVADTICDlEVNDPLP 299 Candidatus Pelagibacter ubique HTCC1062
AAC63846  337 LtapSIGHTVASaEVTTALP 356 thale cress
XP_643254 388 FsqaTVTNSLIAeGVKEPIK 407 Dictyostelium discoideum AX4
YP_444610 313 VegiGLGESISHpEHPEPMT 332 Salinibacter ruber DSM 13855
AAK22726  285 LskaTVADTLCAlDVNEALP 304 Caulobacter crescentus CB15
CAJ04427  297 QepiGIKVPLKIgGTIGKQG 316 Leishmania major
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