Conserved Protein Domain Family
MM_CoA_mutase_ICM_like

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cd03680: MM_CoA_mutase_ICM_like 
Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, isobutyryl-CoA mutase (ICM)-like subfamily; contains archaeal and bacterial proteins similar to the large subunit of Streptomyces cinnamonensis coenzyme B12-dependent ICM. ICM from S. cinnamonensis is comprised of a large and a small subunit. The holoenzyme appears to be an alpha2beta2 heterotetramer with up to 2 molecules of coenzyme B12 bound. The small subunit binds coenzyme B12. ICM catalyzes the reversible rearrangement of n-butyryl-CoA to isobutyryl-CoA, intermediates in fatty acid and valine catabolism, which in S. cinnamonensis can be converted to methylmalonyl-CoA and used in polyketide synthesis.
Statistics
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PSSM-Id: 239652
Aligned: 22 rows
Threshold Bit Score: 923.606
Created: 19-May-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAB40912     10 RLRWQARYDAArk------rdADFTTLSGDPVEPVYGprPGDEyeg--------ferIGWPGEYPFTRGLYPTGYRGRTW 75  Streptomyces coe...
ZP_01195960  16 VRHWEETEVAAflkkq-kerkEQFFTLGDFPVKRVYT--AADAaatp-------iedIGLPGRYPFTRGPYPTMYRSRNW 85  Xanthobacter aut...
ZP_00242470  16 RKDWEANEVGAflkka-perkEQFHTIGDFPVQRTYT--AADIadtp-------ledIGLPGRYPFTRGPYPTMYRSRTW 85  Rubrivivax gelat...
ZP_00656557  24 LAGWESHELEAflqrt-peskGVFRTGSGAPVKRVYT--PADLped--------wndIGLPGQFPFTRGPYPTMYRGRHW 92  Nocardioides sp....
EAO61011     12 HEQWEQQCLWPalrrt-persGPFMTTSSAPIERLYT--PLDLtrdgetltdhflrnIAYPGQYPFTRGIHPTGYRGKLW 88  Chloroflexus aur...
ZP_01148107  14 RQKWEDEVKKSvakh--adqkENWTTVSDLEIKRIYG--PEDIknmd------fekdIAYPGQFPYLRGNQPTGYRGKYW 83  Desulfotomaculum...
AAF10762     17 KNEWMQSVYQPatqkf-perkYNFKNLSDMDPEPIYT--ADDLtdwd------aerdLGYPGEFPYTRGVQSSVYRGKLW 87  Deinococcus radi...
YP_465043    43 RDRWTQDELAEalarl-prrkAAFQTDSGIPIPDVID--PAHLpehd------flrdVGYPGAYPFTRGPQPTMYRGRLW 113 Anaeromyxobacter...
ZP_01205856  44 MRYWHSHFLQVryrlmseqvhPLVETPSGIPLEPVYG--PGDRaa-----------dPPPPGEYPFTRGNFASGYRGKTW 110 Mycobacterium va...
BAE83352      8 FSRWQKSYQEQke------rqGPFMTVSSAPIAPLYA--PDNTpeid------fekdISYPGAYPYTRGVRTNMYRGRLW 73  Desulfitobacteri...
CAB40912     76 TIRQFAGFGNAEQTNERYKMILRNGGGGLSVAFDMPTLMGRDSDDPRSLGEVGHCGVAIDSAADMEVLFKDIPLGDVTTS 155 Streptomyces coe...
ZP_01195960  86 TMRQIAGFGTGEDTNKRFKYLIEQGQTGISTDFDMPTLMGYDSDHPMSDGEVGREGVAIDTLADMEALFDGIDLEKISVS 165 Xanthobacter aut...
ZP_00242470  86 TMRQIAGFGTGEDTNKRFKYLIAQGQTGISTDFDMPTLMGYDSDHPMSDGEVGREGVAIDTLADMEALLADIDLEKISVS 165 Rubrivivax gelat...
ZP_00656557  93 TMRQIAGFGQAEETNKRFQYLINQGQTGLSVDFDMPTLMGLDSDDPMSLGEVGREGVAVDVLSDMEALFDGIDLENISVS 172 Nocardioides sp....
EAO61011     89 TMRMFAGFGSAEETNARFKYLLEQGQTGLSIAFDMPTLYGRDTDHPLVEGEFGKCGVAVSSLADMEILLADLPLDQVSTS 168 Chloroflexus aur...
ZP_01148107  84 TFRMFAGMGTAVETNKRWHYLLKTGQTGLSTAFDFPTLMGYDTDSPKAKGECGKCGVAIDTIEDFRDLINGIPLDKITTS 163 Desulfotomaculum...
AAF10762     88 TMRMFAGFXSAEQTNERFHSLLKAGQTGLSTAFDLPTLMGYDSDHPFSKGEVGKCGVAVSSLADMEILFQGIDPTAVTTS 167 Deinococcus radi...
YP_465043   114 TMRQFAGFGTPADTNQRFKYLLAHGVNGLSTAFDMPALMGYDADHPMSRGEVGKEGVAISTLEDFEILFDGIPLGDVTTS 193 Anaeromyxobacter...
ZP_01205856 111 TFRQYSGFGTAEESNRRYRYLLEQGGTGLSVALDLPTQCGYDSDDAEYGEEVGRVGVAVDTLADAEILFDGIPLDKISTS 190 Mycobacterium va...
BAE83352     74 TMRQFAGFATAVESNQRFKFLLSQGQTGLSVAFDMPTIMGYDSDHPRAYGEVGRVGVAVDSLQDMETLFKDIPLDQVSTS 153 Desulfitobacteri...
CAB40912    156 MTISGPAVPVFCMYLVAAERQGVDASVLNGTLQTDIFKEYIAQKEWLFQPEPHLRLIGDLMEYCAAGIPAYKPLSVSGYH 235 Streptomyces coe...
ZP_01195960 166 MTINPSAWILLAMYIVLAQKRGYDLDKLSGTVQADILKEYMAQKEYIYPIAPSVRIVRDCITYCAKNMKRYNPINISGYH 245 Xanthobacter aut...
ZP_00242470 166 FTINPSAWILLAMYVALGEKRGYDLNKLSGTVQADILKEYMAQKEYIYPIAPSVRIVRDIITYSAKNLKRYNPINISGYH 245 Rubrivivax gelat...
ZP_00656557 173 MTINPSAWILLAMYIAVAEDKGYDLNRLSGTIQNDILKEYVAQKEWIFPVRPSMRIVRDCIAYCAENMARYNPVNISGYH 252 Nocardioides sp....
EAO61011    169 MTINSPAAMIWAMYLVVAEKRGIPWSQLRGTIQNDILKEYIAQNEYIFPPEPSMRLVVDTIEFAARHVPQWNPISVSGYH 248 Chloroflexus aur...
ZP_01148107 164 MTINPPATVLWAMYCASAEQLGIPLTKIGGTIQNDMLKEFIAQKTFMCPPEPSVKLISDTVEFGTKYVPKWNTISISGYH 243 Desulfotomaculum...
AAF10762    168 MTINSPANAVWAMYIANAQKQGKDLGKVGGTIQNDILKEFIAQKEFIYPPAPSVKLVIDTFEWGPKMLPKWNFISVSGYH 247 Deinococcus radi...
YP_465043   194 MTINATAVIALAMYVAVAEKQGVPRAKLGGTLQADMLKEYIAQKEWMIPPTPAVGIVCDMIEFCAKEMPRWNPVSISGYH 273 Anaeromyxobacter...
ZP_01205856 191 FTINGTAAILLAFYVAAAEKKGVPREKLTGTIQNDILKEYASRGTWIWPPEPSLRLIADTIEFCAAEVPKFNAISVAGAH 270 Mycobacterium va...
BAE83352    154 MTTNAPAAILWSMYLVTAEKQGVPAHKLTGTIQNDILKEYIAQKSWIFPPEPSLRLITDSFAFARDHVPKWNTISISGYH 233 Desulfitobacteri...
CAB40912    236 IREAGATAAQELAYTLADGFGYVel-gLSRGLDVDVFAPGLSFFFDAHLDFFEEIAKFRAARRIWARWMRDVYGARTDKA 314 Streptomyces coe...
ZP_01195960 246 ISEAGSSPVDEVAFTLANLIVYVee-vLKTGMKVDDFAPRLAFFFVCQADFFEEIAKFRAVRRCYAKIMKERFGARNPES 324 Xanthobacter aut...
ZP_00242470 246 ISEAGSSPLQEAAFTLANLITYVne-vTETGMHVDEFAPRLAFFFVSQGDFFEEVAKFRALRRCYAKIMKERFGAKNPES 324 Rubrivivax gelat...
ZP_00656557 253 ISEAGANAVQEVAFTMAITRAYVsd-vIAAGVDVDTFAPRLSFFFVSQADFFEEAAKFRAVRRFYAKMMRDEFGAENEQS 331 Nocardioides sp....
EAO61011    249 IREAGSTAVQELAFTLADGFAYVea-aLERGLDIDEFAPRISFFFNAHNDFFEEIAKYRAARRIWARAMRERYGAKNERS 327 Chloroflexus aur...
ZP_01148107 244 IREAGATAVQELAFTLRDGMEYVedaiRRKGLHVDEFAPRLSFFFNSHIDFFEEIAKLRAARRIWAKAMRDRYGSKDPRS 323 Desulfotomaculum...
AAF10762    248 IREAGATGVQELAFTLADGFHYVek-aLERGLDIDEFAPRISFFWDIHNDFFEEIAKLRAARRIWARQMRDRYGAKNPKS 326 Deinococcus radi...
YP_465043   274 IREAGATALQELAFTLADGIEYVqe-cVDRGMDVDAFAPRLSFFWDVHNDLFEEVAKFRAARRIWARTMKERFGAKKRES 352 Anaeromyxobacter...
ZP_01205856 271 FRDAGANAVQEMAFTLADGVTYCdtvvERGRMTIDKFAPQISFFFYTHGDFFEEIAKYRAGRRRWATIVRERYGATTDKA 350 Mycobacterium va...
BAE83352    234 IREAGATALQELAFTLADGFAYVea-gIKAGLDVDDFAPRLSFFFNSHTDFFEEIAKYRAARRIWARHMKENYGAKKEES 312 Desulfitobacteri...
CAB40912    315 QWLRFHTQTAGVSLTAQQPYNNVVRTAVEALAAVLGGTNSLHTNALDETLALPSEQAAEIALRTQQVLMEETGVANVADP 394 Streptomyces coe...
ZP_01195960 325 MRLRFHCQTAAASLTKPQFMVNVVRTTLQALAAVLGGCQSLHTNGFDEAFAIPTEEAMRLALRTQQVIAEESNVTQVIDP 404 Xanthobacter aut...
ZP_00242470 325 MRLRFHCQTAAATLTKPQYMVNVVRTSLQALSAVLGGAQSLHTNGYDEAFAIPTEDAMKMALRTQQIIAEESGVADVIDP 404 Rubrivivax gelat...
ZP_00656557 332 MRLRFHAQTAAATLTKPQPMNNIIRTTLQALSAILGGAQSLHTNGLDEAYTIPSETAMKIALRTQQVIAHETGVPSIVDP 411 Nocardioides sp....
EAO61011    328 WWLRFHTQTAGCSLTAQQPEINIVRTAIQALAAVLGGTQSLHTNSMDEALALPSEKAVTIALRTQQIIAYESGVANTVDP 407 Chloroflexus aur...
ZP_01148107 324 WWMRFHTQTAGCSLTAQQPYNNVVRTATEALAAVLGGTQSLHTNSLDEVLCLPSDHAVQIALRTQQIIAEETGVVNTIDP 403 Desulfotomaculum...
AAF10762    327 WMLRTHSQTAGVSLPAQQPLNNIARVAIQALAAVLGGTQSLHTDAFDEALALPTEESAAIALRTQQIIAYETGVAGVVDP 406 Deinococcus radi...
YP_465043   353 LLLRTHAQTAGVSLTAQQPYNNVVRVALQAFAAVLGGTQSLHTNSLDETYALPTEEAVTVALRTQQIIAHESGADRVVDP 432 Anaeromyxobacter...
ZP_01205856 351 SMFRFGCVAGGASLYAPQAQNNLVRVAYEAMAAVLGGVQSMFTAAWDEPFALPSEESATLALRTQQILAYETGVTKVADP 430 Mycobacterium va...
BAE83352    313 LLLRFHTQTAGCSLTAQQPENNIIRTAYQAMSAVLGGTQSLHTNSMDEVLALPSEKAVQIALRTQQILAYETGIVNTIDP 392 Desulfitobacteri...
CAB40912    395 LGGSWFIEQLTDRIEADAEKIFEQIKERGlrahpdgqhpvgpitsGLLRGIEDGWFTGEIAESAFRYQQSLEKDDKKVVG 474 Streptomyces coe...
ZP_01195960 405 VGGSYYVETLTTEYEKRIMDIISEVDARG----------------GTIKLIQEGWFQKSVADFAYETALRKQSGEKPVIG 468 Xanthobacter aut...
ZP_00242470 405 LGGSYYVEALTTEYEKKIFEILEEVEKRG----------------GTIKLIEQGWFQKQIADFAYETALRKQSGQKPVIG 468 Rubrivivax gelat...
ZP_00656557 412 LGGSYYVEALTDEIETGIHDYLAKIESLG----------------GVVAAIENGFMQREISDTAYQYALRKESGDRPVLG 475 Nocardioides sp....
EAO61011    408 LGGSYFVEALTDRMEREAQQIFDAINAQG----------------GVIAAIRNGYYHREIADAAYRYQQEIDRGERIIVG 471 Chloroflexus aur...
ZP_01148107 404 LAGSYFVEALTNEMEEKAWEYIHKIDDMG----------------GMIAAIDKGFPQLEISDAAYKFQQQIDAQEKVMIG 467 Desulfotomaculum...
AAF10762    407 LAGSYYVEKLTNDIEAAAMGYIEQIRMMG----------------GVEAGIDNGFFQLEMAEAAYRYQREVETKDRIIVG 470 Deinococcus radi...
YP_465043   433 LAGSYYVEYLTDEMERRAIEYLRRIDDMG----------------GMLRAVEEGYPQREIAESAYRWQREVESNERLVVG 496 Anaeromyxobacter...
ZP_01205856 431 LGGSYFVEALTDATEEKIIEIMADLEAHG----------------GMVRCIEDGYLQGLIADEAFKIHQEVESGVRPVVG 494 Mycobacterium va...
BAE83352    393 LAGSYFVEALTRQMEEGAEEYFRKIEERG----------------GVLAAIHQNFFQQEIADAAYRYQKEIEGKDRIIVG 456 Desulfitobacteri...
CAB40912    475 VNVHTGSVTGDLEILrvshe-vereQVRVLGERKDARDDAAVRGALDAMLAAARSg-GNMIGPMLDAVRAEATLGEICGV 552 Streptomyces coe...
ZP_01195960 469 VNTMVDESEVHEIELhpydhttadrQIARTQRVRRERDNVKVSALLDRLVEVAKDetQNIMPVTIELVREGATMGDIVER 548 Xanthobacter aut...
ZP_00242470 469 VNRFVENEEDVKIEIhpydnttaerQISRTRRVRAERDEAKVQAMLDQLVAVAKDesQNLMPLTIELVKAGATMGDIVEK 548 Rubrivivax gelat...
ZP_00656557 476 VNMYIDENSTEEIEThqldpeseqrQIRRVQQVRAERNAETAQAALATLVETARDndANLMPATIAAVRAGLSMGEITGA 555 Nocardioides sp....
EAO61011    472 VNAFQDDEPLTIPILqmdpe-gekrHLERLNRVRRERDQALVARRLAELRAAAQGn-ENMMPAILDCVRAYCTLGEMCDV 549 Chloroflexus aur...
ZP_01148107 468 VNKYVEADEKVDIPFleiddsveteQLERLAAVKRKRDGRRVAETLKDLENACKRg-DNVMPYCIEAVKSFATVQEICDV 546 Desulfotomaculum...
AAF10762    471 VNEYVQDAVEVPIQIidpk--veelQASRLAQVRRERDPQRAEKALEALRDTAVTg-ANSMPAFLECAHAYCTLGEQMDT 547 Deinococcus radi...
YP_465043   497 VNAFQAREEQQIPLLridet-vareQVERLKAVKARRNGAQVAAALAGVERAAREg-TNVVPPVVEAVKAYATLGEIADT 574 Anaeromyxobacter...
ZP_01205856 495 VNKFVVDEPPPDLATyeldaegrdkQLKRLAKVKADRDDVAVKEALAALARAAEGd-DNLMHKLIDCANAYCTVGEMVST 573 Mycobacterium va...
BAE83352    457 VNGFQTEEALEIDLLkidpe-iernQAQRVKELRATRDNLHVQNTLAALKATALSs-DNLIPKIIDAVRAYATEGEIVAV 534 Desulfitobacteri...
CAB40912    553 LRDEWG 558 Streptomyces coelicolor A3(2)
ZP_01195960 549 LKTVWG 554 Xanthobacter autotrophicus Py2
ZP_00242470 549 LKGIWG 554 Rubrivivax gelatinosus PM1
ZP_00656557 556 LRDVFG 561 Nocardioides sp. JS614
EAO61011    550 LREVFG 555 Chloroflexus aurantiacus J-10-fl
ZP_01148107 547 YREVFG 552 Desulfotomaculum reducens MI-1
AAF10762    548 LKAVYG 553 Deinococcus radiodurans R1
YP_465043   575 FRKVHG 580 Anaeromyxobacter dehalogenans 2CP-C
ZP_01205856 574 LKSVWG 579 Mycobacterium vanbaalenii PYR-1
BAE83352    535 LKEVFG 540 Desulfitobacterium hafniense Y51
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