1XWE


Conserved Protein Domain Family
NTR_complement_C5

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cd03582: NTR_complement_C5 
Click on image for an interactive view with Cn3D
NTR/C345C domain, complement C5 subfamily; The NTR domain found in complement C5 is also known as C345C because it occurs at the C-terminus of complement C3, C4 and C5. Complement C5 is activated by C5 convertase, which itself is a complex between C3b and C3 convertase. The small cleavage fragment, C5a, is the most important small peptide mediator of inflammation, and the larger active fragment, C5b, initiates late events of complement activation. The NTR/C345C domain is important in the function of C5 as it interacts with enzymes that convert C5 to the active form, C5b. The domain has also been found to bind to complement components C6 and C7, and may specifically interact with their factor I modules.
Statistics
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PSSM-Id: 239637
Aligned: 4 rows
Threshold Bit Score: 256.281
Created: 29-Mar-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:putative convertase binding site
Evidence:
  • Comment:determined by alanine scanning mutagenesis
  • Comment:this site may form a distal binding site for the classical pathway C5 convertase

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                      
1XWE_A       2 SHMADCGQMQeel-------dlTISAETRKQTACKpeiAYAYKVSITSITVENVFVKYKATLLDIYKTGE-AVAEKd--- 70   human
XP_415405 1000 ADRFLCVGFRisq-------lfHVGMLNPGTFSVYeyhAPVYKVNILSRSEEGYFVKYSATILDLYKRGQ-AFAQKn--- 1068 chicken
BAC23057  1537 CMAAECCNFKsti-------dpKITAVQRKNDMCKesmNYAFKVLIESSEAGGDFVTYKAKVKAVLMKGQtDDLKTd--- 1606 common carp
CAF94607  1576 CVAEQCQCMAaacatyrggvdvTLTAARRTSETCRpqiRYAYKVMVKSSAAEGDFMTYAATVVEVLKNSD-KELEAvssg 1654 Tetraodon nigrov...
Feature 1                                      ######                                          
1XWE_A      71 SEITFIKKVTCTNAELVKGRQYLIMGKEALQIKYNASFRYIYPLDSlTWIEYWPRDTTCss--cqAFLANLDEFAEDIFL 148  human
XP_415405 1069 NEVTFVKKKTCANVELSPGMQYLIMGKEALKINIGYSFRFQYPLDSsTWIEWWPPNTACtf--cqEFLNRMEDFVEDLII 1146 chicken
BAC23057  1607 SEIDLVKKATCSSTNFEVGKQYLIMTAESIKIRMNRGYKYKFPLDSrAWVDWWPLDTDCrddaciQYANVLGEFESDFVL 1686 common carp
CAF94607  1655 TPVELVKRATCTSVEIQENQQYLLMGSGGSEIRLERSFRYRLPLDSeALLELWPTDCGSpe--clDFVSQLDDFALDLQL 1732 Tetraodon nigrov...
Feature 1         
1XWE_A     149 NGC 151  human
XP_415405 1147 SGC 1149 chicken
BAC23057  1687 FGC 1689 common carp
CAF94607  1733 MSC 1735 Tetraodon nigroviridis

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