2AJT


Conserved Protein Domain Family
L-arabinose_isomerase

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cd03557: L-arabinose_isomerase 
Click on image for an interactive view with Cn3D
L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Statistics
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PSSM-Id: 239619
Aligned: 19 rows
Threshold Bit Score: 864.679
Created: 4-Apr-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1:putative metal binding site [ion binding site]
Evidence:
  • Comment:Based on the Mn binding site of L-fucose isomerase.
  • Citation:PMID 9367760
  • Comment:The catalytic activity of L-Arabinose isomerase is metal ion dependent; Mn2+ increases the enzyme's activity and heat stability.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                       
2AJT_C        7 YEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTeaklpCKLVLKPLGTTPDEITAICRDANYddpCAGLVVWLHTFSPA 86  Escherichia coli
BAD62950      7 YQFWFITGSQPLYGQEALDEVAAHSKAMVERLKEkl--pEELVLKPVASSPERILELFRAANGdnnCAGIITWMHTFSPA 84  Bacillus clausii...
AAO75458      8 YEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNEsgklpVKVVYKGTANSSKEVEAVFKAANNddkCVGVITWMHTFSPA 87  Bacteroides thet...
AAD35365      7 YEFWFLVGSQYLYGLETLKKVEQQASKIVDSLNDdpifpSKIVLKPVLKSSSEITEIFEKANAdpkCAGVIVWMHTFSPS 86  Thermotoga marit...
Q9RHG2        8 EEIWFVTGSQSLYGQEILDQVAEQSRALAERLDAsadlpVAVRWKPVVTTSEAILDVLRDASSspqCVGVITWMHTFSPA 87  Mycobacterium sm...
ZP_00411249  17 YEVWFLTGSQHLYGEDVLKQVAAQSQEIADALNGssdvpVKVVWKPVLTDSDAIRRTALEANAddsVIGVTAWMHTFSPA 96  Arthrobacter sp....
ZP_01136569   9 YECWFLTGSQHLYGEDVLSAVARQSQAIVEALNAag-lpVRLVWKPVLTDATGIRRMCSEASAtdaCIGVIAWMHTFSPA 87  Acidothermus cel...
ZP_00907370   7 YEFWFITGSQHLYGPEVIEQVSDNSKIIVDELNKkd-lpYKIVFKTVATDSPSIRKVCNDANNdenCAGIITWMHTFSPA 85  Clostridium beij...
CAA61585      7 YEFWFVTGSQHLYGEETLELVDQHAKSICEGLSGis-srYKITHKPVVTSPETIRELLREAEYsetCAGIITWMHTFSPA 85  Bacillus subtilis
AAK79314      7 MEFWFVVGSQHLYGEEALKEVRKNSETIVDELNKsanlpYKIIFKDLATSADKIKEIMKEVNYrdeVAGVITWMHTFSPA 86  Clostridium acet...
Feature 1                                                                                       
2AJT_C       87 KMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWqdKQAHERIGSWMRQ 166 Escherichia coli
BAD62950     85 KMWIAGLNELNKPMLHFHTQYNRDIPWGDIDMDFMNLNQSAHGDREFGFMVSRMNIDRKVVAGHWqdARVMKRIGDWMKT 164 Bacillus clausii...
AAO75458     88 KMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMDFMNLNQSAHGDREFGHICTRMRIRRKVVVGYWkeEETLHKIAVWMRV 167 Bacteroides thet...
AAD35365     87 KMWIRGLSINKKPLLHLHTQYNREIPWDTIDMDYMNLNQSAHGDREHGFIHARMRLPRKVVVGHWeeKEVREKIAKWMRV 166 Thermotoga marit...
Q9RHG2       88 KMWIRGLSALQKPMLHLHTQFGVEIPWDTIDMDFMNLNQAAHGDREFGYIQTRLSVPRTTVAGHVgdPRTTARIGSWMRA 167 Mycobacterium sm...
ZP_00411249  97 KMWIQGLDLLRKPLLHLHTQANVELPWADIDFDFMNLNQAAHGDREFGYIQSRLGIPRKTVVGHVsnPEVTRQVGVWQRA 176 Arthrobacter sp....
ZP_01136569  88 KAWINGLLALRKPLLHLHTQANLTLPWSTIDMDFMNLNQAAHGDREFGYVAARLAIPRKIVTGHFsdPDVVRDIAAWQRA 167 Acidothermus cel...
ZP_00907370  86 KMWIHGLTELRKPLLHLHTQFNKEIPWGTIDMDFMNLNQAAHGDREFGYIGARLDIARKIVVGHWtdASVSADIAKWMAP 165 Clostridium beij...
CAA61585     86 KMWIEGLSSYQKPLMHLHTQYNRDIPWGTIDMDFMNSNQSAHGDREYGYINSRMGLSRKVIAGYWddEEVKKEMSQWMDT 165 Bacillus subtilis
AAK79314     87 KMWIAGTKILQKPLLHFATQYNENIPWKTIDMDYMNLHQSAHGDREYGFINARLKKHNKVVVGYWkdKEVQKQVSDWMKV 166 Clostridium acet...
Feature 1                                                                                       
2AJT_C      167 AVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYEScytmtp-atqi 245 Escherichia coli
BAD62950    165 VNAYQESKQLKIARFGDNMREVAVTEGDKVEAQIKLGWSVSGFGIGDLVEVINSVSTEEVNALMDEYRSlyt------fh 238 Bacillus clausii...
AAO75458    168 CAGWADSQDMLIIRFGDQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMEYHKDIKNADVDALVATYFNdydhdasledk 247 Bacteroides thet...
AAD35365    167 ACAIQDGRMGQIVRFGDNMREVASTEGDKVEAQIKLGWSINTWGVGELAERVKAVPEREVEELLKEYREkyim-----pe 241 Thermotoga marit...
Q9RHG2      168 ALGAAELRSLRIARFGDNMRDVAVTEGDKVEAESHFGVSVNTYSVNDLAKAVYDVSDPEIDKLVQEYEDtyavae-elrr 246 Mycobacterium sm...
ZP_00411249 177 SAGWAAVRTLKLTRFGDNMRNVAVTEGDKTEAELRFGVSVNTWSVNELADAVHGAAESDVDALVAEYERlyevvp-elka 255 Arthrobacter sp....
ZP_01136569 168 AAGLADLRSTRLVRFGDTMRNVAVTDGDRVEAQIRLGSAIETYGVHDLGVRVDAVAESDVDALVDRYLAdydmap-elti 246 Acidothermus cel...
ZP_00907370 166 AVAFTEGHSIKVARFGDNMRNVAVTDGDRIEAQIKFGWIVDYYGVGDLVKSMDAVTEDQIDELMAEYSKlyd------id 239 Clostridium beij...
CAA61585    166 AAALNESRHIKVARFGDNMRHVAVTDGDKVGAHIQFGWQVDGYGIGDLVEVMDRITDDEVDTLYAEYDRlyvise-etkr 244 Bacillus subtilis
AAK79314    167 AAGYIASESIKVARFGDNMRNVAVTEGDKVEAQIQFGWTVDYFGIGDLVAEMDKVSQDEINKTYEEFKDlyildp-gend 245 Clostridium acet...
Feature 1                                                                        #              
2AJT_C      246 hGEKRQNVLEAARIELGMKRFLeqGGFHAFTTTFEDLHg-----lKQLPGLAVQRLMQQgYGFAGEGDWKTAALLRIMKV 320 Escherichia coli
BAD62950    239 rDANIAAVEEQARIEIGIERFLqqGDFRAFSTTFEDLHg-----mKQLPGLAVQRLMAKgYGFAGEGDWKTAALLRVLKV 313 Bacillus clausii...
AAO75458    248 sTEAYQKVWNAAKAELALRAILkaKGAKGFTTNFDDLGqtdgsyfDQIPGLASQRLMAEgYGFGAEGDWKSAALYRTVWV 327 Bacteroides thet...
AAD35365    242 dEYSLKAIREQAKIEIALREFLkeKNAVGFTTTFEDLHd-----lPQLPGLAVQRLMEEgYGFGAEGDWKAAGLVRAIKV 316 Thermotoga marit...
Q9RHG2      247 gGERHASLREGARIELGLRHFLa-DGFGAFTTNFEDLGd-----lRQLPGLAVQRLMADgFGFGAEGDWKTSAMVRTVKT 320 Mycobacterium sm...
ZP_00411249 256 gGARHESLRYSARIELGLRSFLeaNGSAAFTTSFEDLGe-----lRQLPGMAVQRLMADgYGFGAEGDWKTAILVRAAKV 330 Arthrobacter sp....
ZP_01136569 247 gGARHESLRYAAKLELALRSFLhdGRFTAFTTNFEDLGp-----lRQLPGIAVQRLMADgFGFGAEGDWKTALLVRAVKT 321 Acidothermus cel...
ZP_00907370 240 pKASIDSIREQAKIEIGLRTFLdaRGYTAFTTNFEALHg-----mKQLPGLAVQHLMAEgYGFGAEGDWKTAALLRAMKI 314 Clostridium beij...
CAA61585    245 dEAKVASIKEQAKIELGLTAFLeqGGYTAFTTSFEVLHg-----mKQLPGLAVQRLMEKgYGFAGEGDWKTAALVRMMKI 319 Bacillus subtilis
AAK79314    246 pAFYEKQVKEQIKIEIGLRRFLekGNYNAFTTNFEDLYg-----mKQLPGLAVQRLNAEgYGFAGEGDWKTAALDRLLKV 320 Clostridium acet...
Feature 1                   #                                                                   
2AJT_C      321 MStglqggTSFMEDYTYHFEkgNDLVLGSHMLEVCPSIAveeKPILDVQHLGIG-GKDDPARLIFNTQTGPAIVASLIDL 399 Escherichia coli
BAD62950    314 LAgn--vgTSFMEDYTNHLEpgQEMILGSHMLEVCPTISa-qKPEIVVAPLSMG-NREDPARLVFKGKAGRALNAALIDM 389 Bacillus clausii...
AAO75458    328 MNqglpkgCSFLEDYTLNFDgaNSSILQSHMLEICPLIAa-nKPRLEVHFLGIGiRKSQTARLVFTSKTGTGCTATVVDM 406 Bacteroides thet...
AAD35365    317 MGtslpggTSFMEDYTYHLTpgNELVLGAHMLEVCPTIAk-eKPRIEVHPLSIG-GKADPARLVFDGQEGPAVNASIVDM 394 Thermotoga marit...
Q9RHG2      321 MGvglpggTSFMEDYTYDLTpgSERILGAHMLEVCPSIAg-qTPSLEVHPLGIG-NREDPVRLRFTAAPGSGVVLGICDM 398 Mycobacterium sm...
ZP_00411249 331 MGsglpggASLMEDYTYHLApgQEKILGAHMLEVCPSLTa-tKPRVEIHPLGIG-GKEDPVRMVFDTDAGPGVVVALSDM 408 Arthrobacter sp....
ZP_01136569 322 MSrglpggTSFMEDYTYHLEpsGRLVLGAHMLEVCPTLTs-aTPRCEIHPLLMG-GREDPVRLVFTADPAPAVIVGLCDM 399 Acidothermus cel...
ZP_00907370 315 MAsg--kgTGLMEDYTYNMDseNGLILGAHMLEICPTLAa-tKPVIEVHPLGIG-GKEDPARLVFKGASGPAVAASLIDM 390 Clostridium beij...
CAA61585    320 MAkg--krTSFMEDYTYHFEpgNEMILGSHMLEVCPTVAl-dQPKIEVHSLSIG-GKEDPARLVFNGISGSAIQASIVDI 395 Bacillus subtilis
AAK79314    321 MTnn--taTGFMEDYTYELSrgNEKALGAHMLEVDPTFAs-dKPKVIVKPLGIG-DKEDPARLIFNGSTGKGVAVSMLDL 396 Clostridium acet...
Feature 1                                                         #                             
2AJT_C      400 GdRYRLLVNCIDTVKTPhsLPKLPVANALWKAQpDLPTASEAWILAGGAHHTVFSHAlNLNDMRQFAEMHDIEITVIDnd 479 Escherichia coli
BAD62950    390 GsRFRLVANEVEAVENPhdMPKLPVASVLWKPLpSFSEATEAWIYAGGAHHTVFSYEiSKEQLADWASLMGIECIVIDdq 469 Bacillus clausii...
AAO75458    407 GnRFRLIVNDVECIEPKp-LPKLPVASALWIPMpNLEVGAGAWILAGGTHHSCFSYDlTAEYWEDYAEIAGIEMVHINkd 485 Bacteroides thet...
AAD35365    395 GnRFRLVVNKVLSVPIErkMPKLPTARVLWKPLpDFKRATTAWILAGGSHHTAFSTAiDVEYLIDWAEALEIEYVVIDen 474 Thermotoga marit...
Q9RHG2      399 GsRFRLVANHVTVVEPSapLPNLPVACAVWEPEpSWSTSTEAWLMAGGPHHTVLTTAvSPTTLDDFATITGTELLQIDqh 478 Mycobacterium sm...
ZP_00411249 409 RdRFRLVANAVDVVDLDepLPNLPVARALWSPKpDFATSAAAWLTAGAAHHTVLSTQvGMDVFEDFAEIAKTELLTIDeg 488 Arthrobacter sp....
ZP_01136569 400 GdRLRLVANTADLVAPPepLPRLPVARAVWQPHpELKTAATAWIAAGGPHHTALSTAvSAREIRDFARMAGLELVLIDeh 479 Acidothermus cel...
ZP_00907370 391 GnRFRLIVNSVDCVEVTedMPNLPVASVLWKPQpSLKEGAKAWIMAGGAHHTSFSFYvDEEQLLDWADMVGVECVVINnd 470 Clostridium beij...
CAA61585    396 GgRFRLVLNEVNGQEIEkdMPNLPVARVLWKPEpSLKTAAEAWILAGGAHHTCLSYElTAEQMLDWAEMAGIESVLISrd 475 Bacillus subtilis
AAK79314    397 GtHYRLIINGLTAVKPDedMPNLPVAKMVWKPEpNFIEGVKSWIYAGGGHHTVVSLElTVEQVYDWSRMVGLEAVIIDkd 476 Clostridium acet...
Feature 1                   
2AJT_C      480 trlpaFKDALRW 491 Escherichia coli
BAD62950    470 snvgqVRKELFW 481 Bacillus clausii KSM-K16
AAO75458    486 ttiscFKKELRM 497 Bacteroides thetaiotaomicron VPI-5482
AAD35365    475 ldledFKKELRW 486 Thermotoga maritima MSB8
Q9RHG2      479 ttpreFQREMRW 490 Mycobacterium smegmatis
ZP_00411249 489 ttirqFKKELNW 500 Arthrobacter sp. FB24
ZP_01136569 480 taldaALDRLWA 491 Acidothermus cellulolyticus 11B
ZP_00907370 471 tklstFKNELKF 482 Clostridium beijerincki NCIMB 8052
CAA61585    476 ttihkLKHELKW 487 Bacillus subtilis
AAK79314    477 ---tkLRDIIEK 485 Clostridium acetobutylicum ATCC 824

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