Conserved Protein Domain Family
Rieske_RO_Alpha_OHBDO_like

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cd03545: Rieske_RO_Alpha_OHBDO_like 
Rieske non-heme iron oxygenase (RO) family, Ortho-halobenzoate-1,2-dioxygenase (OHBDO)-like subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of OHBDO, salicylate 5-hydroxylase (S5H), terephthalate 1,2-dioxygenase system (TERDOS) and similar proteins. ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. OHBDO converts 2-chlorobenzoate (2-CBA) to catechol as well as 2,4-dCBA and 2,5-dCBA to 4-chlorocatechol, as part of the chlorobenzoate degradation pathway. Although ortho-substituted chlorobenzoates appear to be particularly recalcitrant to biodegradation, several strains utilize 2-CBA and the dCBA derivatives as a sole carbon and energy source. S5H converts salicylate (2-hydroxybenzoate), a metabolic intermediate of phenanthrene, to gentisate (2,5-dihydroxybenzoate) as part of an alternate pathway for naphthalene catabolism. S5H is a multicomponent enzyme made up of NagGH (the oxygenase components), NagAa (the ferredoxin reductase component), and NagAb (the ferredoxin component). The oxygenase component is made up of alpha (NagG) and beta (NagH) subunits. TERDOS is present in gram-positive bacteria and proteobacteria where it converts terephthalate (1,4-dicarboxybenzene) to protocatechuate as part of the terephthalate degradation pathway. The oxygenase component of TERDOS, called TerZ, is a hetero-hexamer with 3 alpha (TerZalpha) and 3 beta (TerZbeta) subunits.
Statistics
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PSSM-Id: 239616
Aligned: 9 rows
Threshold Bit Score: 295.507
Created: 21-Mar-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAD20006     16 RVPYKVFTDKAYLELENERIFRGKVWAYVALEAEIPEPGDYKATHIGLSPVIVTRAEDGSIHVMENRCAHRGALVCEQRY 95  Pseudomonas aeru...
BAC81540     16 HSPFATYLDEDVFKLEQENLYRGKVWSYIGLDVEVPQPGDYKTTFVGDTPIVLTRGEDGSLNAWVNRCAHKGAVICRERH 95  Cycloclasticus s...
BAC65433     15 AVDYKVYHDTQIFASEQRSVFKGRTWCYLGLEAEIPNAGDFRATHVGETPVVLVRGQEGKIHAWVNRCAHKGATVCRSLR 94  Sphingomonas sp. P2
AAD04002     16 AVDYAVYHSQAIFTAEQENIFRGQTWCYLGLEAELANSGDFRSTHVGNTPVVVTRATDGTIHAWVNRCAHKGATVCRSLR 95  Novosphingobium ...
YP_195878    16 RVPYKVFTDKAYLELENERIFRGKVWAYVALEAEIPEPGDYKATHIGLSPVIVTRAEDGSIHVMENRCAHRGALVCEQRY 95  Achromobacter xy...
BAC65426     21 RVPYRVFTDPEYHAREQEKIFQGEAWSFVALEAEVPEAGDFKSTFIGETPVIVTRAADGAVHVVVNRCAHRGALVCRELR 100 Sphingomonas sp. P2
NP_049213    20 RVPYRVFTDRQYYDREQENIFKGNCWSFVGLEAEVPQAGDFKSTFVGETPVILTRDSDGSLHVVVNRCAHRGALVCREMR 99  Novosphingobium ...
ZP_00685710  43 RVPYKVFSSRAVYDREQERIFRGPTWNFVALEAEIPKAGDFKSTFVGDTPVVVTRTEDGTLSAWVNRCAHRGAQVCRKSR 122 Burkholderia amb...
ZP_00983457  28 RVPYKVFSSRAVYDREQERIFRGPTWSFVALEAEIPNAGDFKSTFVGDTPVVVTRTDDGALSAWVNRCAHRGAQVCRKSR 107 Burkholderia dol...
AAD20006     96 GN--ASSLQCVYHQWDYNLKGELKGVPFLRGVRGKGGMCKPFDKSRHGLTKLRVATLNGIVFASFSDEVEPL 165 Pseudomonas aeruginosa
BAC81540     96 GHsdDGAFTCVYHQWAYDAKGDLKGVPFRRGMKGQGGYAKDFDMKNHGLETLRVQTVAQMIFATFDPETPDL 167 Cycloclasticus sp. A5
BAC65433     95 GNqaDGAFVCVYHQWAYDSEGTLVGVPFRRGLKGVGGYDKDFDPANHSLEKLRVESYKGMVFGTFSAEIEPL 166 Sphingomonas sp. P2
AAD04002     96 GNqaDGAFVCVYHQWAYDATGALVGVPFRRGLKGVGGYSKEFNMAEHSLERLRVETFGGLVFGTFNSTIAPL 167 Novosphingobium aromatic...
YP_195878    96 GN--ASSLQCVYHQWDYNLKGELNGVPFLRGVRGKGGMCKPFDKSRHGLTKLRVATLNGIVFASFSDEVEPL 165 Achromobacter xylosoxidans
BAC65426    101 GN--RPNLECVYHQWAYDLAGNLIGVPFRRGLKGQGGMPGDFDMKQHGLKQLRVGIVGGLVFASFSQSVVPL 170 Sphingomonas sp. P2
NP_049213   100 GN--RASLECVYHQWAYDLKGNLIGVPFRRGLKGQGGMPGDFDMSQHNLRQLRTESVGGLVFASFSETVESC 169 Novosphingobium aromatic...
ZP_00685710 123 GN--ASSHTCVYHQWSFDNQGNLLGVPFRRGQKGMTGMPADFDPKQHGLRKLRVDSYRGLVFATFSDEVMPL 192 Burkholderia ambifaria AMMD
ZP_00983457 108 GN--ASSHTCVYHQWSFDNRGNLLGVPFRRGQKGMTGMPADFDPKRHGLRKLRVDSYRGLVFASFSDEVAPL 177 Burkholderia dolosa AUO158
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