1QLA


Conserved Protein Domain Family
SQR_QFR_TypeB_TM

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cd03526: SQR_QFR_TypeB_TM 
Click on image for an interactive view with Cn3D
Succinate:quinone oxidoreductase (SQR) and Quinol:fumarate reductase (QFR) Type B subfamily, transmembrane subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol, while QFR catalyzes the reverse reaction. SQR, also called succinate dehydrogenase or Complex II, is part of the citric acid cycle and the aerobic respiratory chain, while QFR is involved in anaerobic respiration with fumarate as the terminal electron acceptor. SQR and QFR share a common subunit arrangement, composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Type B proteins contain one transmembrane subunit and two heme groups. The heme and quinone binding sites reside in the transmembrane subunits. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron donor/acceptor (quinol or quinone). The reversible reduction of quinone is an essential feature of respiration, allowing the transfer of electrons between respiratory complexes.
Statistics
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PSSM-Id: 239602
Aligned: 3 rows
Threshold Bit Score: 205.533
Created: 3-Mar-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:proximal heme binding site [chemical binding site]
Evidence:
  • Structure:1QLA; Wolinella succinogenes Fumarate Reductase transmembrane subunit binds the proximal heme; contacts at 3.5A
  • Comment:Members of this subfamily contain two heme groups, one proximal and the other distal to the [3Fe-4S] cluster of the iron-sulfur subunit. Two histidines coordinate with iron in each heme.
  • Comment:Heme is essential for functional assembly and structural stability of the transmembrane subunit.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         ##  #   #                                                       ##  #       
1QLA_C     26 LDWWQSATGLF-LGLFMIGHMFFVSTillGDNVMLWVTKKFeldfifeggkPIVVSFLAAFVFAVFIAHAFLAMRKFpin 104 Wolinella succinog...
P08064      9 FRRLHSLLGVIpVGIFLIQHLVVNQFaarGAEAFNSAAHFMds-------lPFRYALEIFIIFLPLIYHAVYGVYIAf-- 79  Bacillus subtilis
ABB32622   10 RKVLMAITGQF-LVLFIIVHLLGNSSi-fIPGGINAYAEHLha-------lPPLVWGFRLVILCVAIIHIFFGVQLSle- 79  Geobacter metallir...
Feature 1                          #      #                                                   
1QLA_C    105 yrQYLTFKTHKdlmrhgdTTLWWIQAMTGFAMFFLGSVHLYIMMTqpq------------tigPVSSSFRMVSEwMWPLY 172 Wolinella succinog...
P08064     80 --TAKNNAGQYsy---mrNWLFVLQRVTGIITLIFVSWHVWETRIaaqmg---------aevnFDMMANILSSPaMLGFY 145 Bacillus subtilis
ABB32622   80 nrAANPDTYAVknl-keaTLSSTSMLYTGLLLLAFILYHLLQFTVratpdikvgvdalgrvdvFGMVTNSFSHGiIAVLY 158 Geobacter metallir...
Feature 1              #   #   #  #                                      
1QLA_C    173 LVLLFAVELHGSVGLYRLAVKWGwfdg-etpdKTRANLKKLKTLMSAFLIVLGLLTFGA 230 Wolinella succinogenes
P08064    146 IVGVLSTIFHFSNGLWSFAVTWGitv----tpRSQRISTYVTLIIFVALSYVGLKAIFA 200 Bacillus subtilis
ABB32622  159 IAAMVVLFLHLSHGIQSFFQTMGwnnhksrpvFSTIGKVAAVVFLLGYASIPFVIVTGI 217 Geobacter metallireducens GS-15

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