Conserved Protein Domain Family
MutL_Trans_hPMS_1_like

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cd03485: MutL_Trans_hPMS_1_like 
MutL_Trans_hPMS1_like: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to human PSM1 (hPSM1) and yeast MLH2. hPSM1 and yMLH2 are members of the DNA mismatch repair (MutL/MLH1/PMS2) family. This transducer domain is homologous to the second domain of the DNA gyrase B subunit, which is known to be important in nucleotide hydrolysis and the transduction of structural signals from ATP-binding site to the DNA breakage/reunion regions of the enzymes. PMS1 forms a heterodimer with MLH1. The MLH1-PMS1 complex functions in meiosis. Loss of yMLH2 results in a small but significant decrease in spore viability and a significant increase in gene conversion frequencies. A role for hMLH1-hPMS1 in DNA mismatch repair has not been established. Mutation in hMLH1 accounts for a large fraction of Lynch syndrome (HNPCC) families, however there is no convincing evidence to support hPMS1 having a role in HNPCC predisposition.
Statistics
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PSSM-Id: 239567
Aligned: 14 rows
Threshold Bit Score: 128.156
Created: 23-Feb-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
ATP binding
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:By similarity to Escherichia coli MutL.
  • Comment:conserved Lys residue from the transducer domain interacts with the gamma-phosphate of bound nucleotide.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
P54277    205 DHKMALMSVLGtav-mnNMESFQyhse-------------------esqiYLSGFLPKc--dADHSFtslsTPERSFIFI 262  human
XP_624969 160 SFEESIAYILGkki-tcNMDWIDitd---------------------tdiKMKLMVPLk--tVKNDFel-fQSDSQYIFV 214  honey bee
CAG08289  208 DHRSALAATLGpsv-vmNLVPCHhrqe-------------------qpeiSLEGFFPKp--gADYSStstsGPDRTFTFV 265  Tetraodon nigrovi...
XP_797096 205 NIRAALLNMLGsnv-msQLIRVErnde-------------------etqvKIEGFLPKp--gSDDQLttrsTDDHTWIAV 262  purple urchin
EAA68631  212 STQEAITQIFGhtl-aaQLVEVSsdsnvecgs----------tgvqlgtlRITALLPRp--gSDVQVi---KGKGAFISV 275  Gibberella zeae PH-1
AAC62762   42 NVEDAVLKVISkdc-alQCDWTAles---------------------dgfEIHAFLPKp--tANRSKi---ANYGAFISI 94   Phaeosphaeria nod...
XP_963744 210 ALKDAVVQVMGrel-aaQCMLQTspfsvsdtetkipqtcnlplaqqpskfVFEAYLPTt--tADIRK----ICKGPFISV 282  Neurospora crassa...
AAH55651  205 DHRTALMAVLGaas-vaNMLPIQhhqe-------------------qpeiTIDGFFPKp--gSDLNStsssTTDKSFIFV 262  zebrafish
NP_013135 219 DPKISRARSLSllarlkKPVPLNfiveenf--------------videkiNLDLILPRmvpeSDVINi---KRRFKFLSV 281  baker's yeast
XP_659168 214 TLTEAALRVGGtgi-apNCILKNwptpskdgn----------aspedlgfRLVALLPKv--gSDITKf---NNLGQYISV 277  Aspergillus nidul...
Feature 1                                                                    #                
P54277    263 NSRPVHq-----KDILKLIRHHYNlkclk-------estrlYPVFFLKIDVPTadVDVNLTPDKSQVLLqnKESVLIALE 330  human
XP_624969 215 NNRPIKyke-leKIVIKIILEAFGqel-----------srkKPIFVIYILINAanIDVNLDPNKNFVLF--KEQVINVVI 280  honey bee
CAG08289  266 NNRPVHh-----KDIMKLLRQHYTaqypad------garsrYPILMLSVTVPPsaVDVNLTPDKTQVLLhdKEAVLTALE 334  Tetraodon nigrovi...
XP_797096 263 NGRPVIm-----KDISKVVKQYYSqahpk-------agnvrHVIMCLAVSMPThlVDVNLEPNKTKVLLqnNDAVICLII 330  purple urchin
EAA68631  276 DSRPISs----iRSTGKKLVSVFKssiskifgspdssrapaNPFLQISIQCPPgsYDPNVSQLKDEVMFdnEPAVISCFQ 351  Gibberella zeae PH-1
AAC62762   95 DSRPVSn----sRGTIKQVVAAFKerlrkss---qsltavkDPFFCMNIICPPdsYDPNIEPAKDDVMFddSKVVLEVVD 167  Phaeosphaeria nod...
XP_963744 283 DSRPLSf----tRGTAKKLKAVFEkhfkgslipenssklpgSPFIRLNIRCPLgsYDPNVEPSKYDVLFhnEELVLREFE 358  Neurospora crassa...
AAH55651  263 NSRPVHh-----KEILKLIKQYYTsaqsns-----esvsrrYPTFMMNITIPAstVDVNLTPDKTEVMLqnKDEVLLSVE 332  zebrafish
NP_013135 282 NERALSl----nLETGKTISKLLSsiyrd-------fslldPMVWFINLNCDTklLDVNIEPEKNDVMIksFEVIFKKIE 350  baker's yeast
XP_659168 278 DNRPLSsgrgfaQDITKLFRRYLRsaasrdg----lsppinDPFLCVHVLCLGgaYDANIEPSKDDVLFenQQAVLSLVE 353  Aspergillus nidul...
Feature 1             
P54277    331 NLMTTCYG 338  human
XP_624969 281 NMVQKYLE 288  honey bee
CAG08289  335 ALLVSLYG 342  Tetraodon nigroviridis
XP_797096 331 QMLEELYK 338  purple urchin
EAA68631  352 ALCDAIYV 359  Gibberella zeae PH-1
AAC62762  168 NLLRSHYP 175  Phaeosphaeria nodorum
XP_963744 359 SFLLSIYP 366  Neurospora crassa N150
AAH55651  333 TMLISLYG 340  zebrafish
NP_013135 351 NKLKLLLE 358  baker's yeast
XP_659168 354 DLLRDTYG 361  Aspergillus nidulans FGSC A4

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