Conserved Protein Domain Family
Rieske_YhfW_C

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cd03477: Rieske_YhfW_C 
YhfW family, C-terminal Rieske domain; YhfW is a protein of unknown function with an N-terminal DadA-like (glycine/D-amino acid dehydrogenase) domain and a C-terminal Rieske domain. The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. It is commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes. YhfW is found in bacteria, some eukaryotes and archaea.
Statistics
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PSSM-Id: 239559
Aligned: 17 rows
Threshold Bit Score: 132.044
Created: 24-Mar-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
[2Fe-2S]
Feature 1:[2Fe-2S] cluster binding site [ion binding site]
Evidence:
  • Comment:Based on similarity with other superfamily members.
  • Comment:The Rieske [2Fe-2S] cluster is liganded to two histidine and two cysteine residues present in conserved sequences called Rieske motifs.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                # ##              #  # #               
EAN07570    415 RATVPLDsiaPGEGGIIAHn-gEQLAVCRQEDGSLITLSATCTHMGCIVGWNEIDRTWDCPCHGSRFDEWGEVIAGPAVS 493 Mesorhizobium sp...
ZP_00510670 425 PMADNTDi-kAGEGKIINVn-gQRLGAYRDQQGTLHVVDTTCTHMGCELYWNSAEKSWDCPCHGSRFTYEGDIIEGPAVT 502 Clostridium ther...
CAE80077    422 DELKNITa-rPGEGRLVHQg-aKTFAVYTNEKNETATLNAVCPHLGGIVHWNEAEKTWDCPCHGSRFACTGEVINGPAIS 499 Bdellovibrio bac...
NP_771844   522 DALASVErlrLGEGRLVRSg-lKKIAACRDRDGKLHLLSASCTHLGCVVHWNSLEQCWDCPCHGSQFAPDGTALNGPAVS 600 Bradyrhizobium j...
ZP_00663254 427 LPEYSEPd--KGEAKTVNFe-gDRAGIYKDENDKLHMVDTTCTHLGCELLWNNAEKTWDCPCHGSRFSYKGEIVEGPAIY 503 Syntrophomonas w...
AAM03911    406 SMEEISGi-gPGQGTIIERgeeEAVAVYRDPQGVLYTLNPACRHMGCFVSWNDAEKTWDCLCHGSRYNARGEVIQSPAVY 484 Methanosarcina a...
BAD57544    430 NSGTTVPp--EGCGRVERHg--LHPTAVSTVDGVTHEVSAVCSHLYGIVHWNDAERSWDCPLHGSRFAPDGSVLEGPATK 505 Nocardia farcini...
ZP_01204747 422 PLTSSAEe--PADGTGVVSgppWRLRATSVVDGVQRTVSPVCPHLGGIVKWNDSDRAWECPLHGSRFAPDGALLEGPATR 499 Mycobacterium va...
NP_633680   428 THKEASQi-gPEEGAIVKIe-gERVAAYRDRNGVLYTLNPSCRHLGCIVSWNDAEKTWDCPCHGSRYKATGEVIHSPAVY 505 Methanosarcina m...
AAO35051    423 TIPDNIEv-nNGEGKVIEIa-gDKYGAYRDNDGVLHIVDITCTHLGCELKWNDAEKSWDCPCHASRFTYKGDIMDGPAIR 500 Clostridium teta...
Feature 1                      
EAN07570    494 ALKPrdIRDleKGGP 508 Mesorhizobium sp. BNC1
ZP_00510670 503 PLNVhrDVN--TIEK 515 Clostridium thermocellum ATCC 27405
CAE80077    500 GLKTavMKK--TQEK 512 Bdellovibrio bacteriovorus HD100
NP_771844   601 PLAPveSSP--SAQA 613 Bradyrhizobium japonicum USDA 110
ZP_00663254 504 QLHQanDEA--NIVE 516 Syntrophomonas wolfei str. Goettingen
AAM03911    485 GLLEkkVRG--ENRK 497 Methanosarcina acetivorans C2A
BAD57544    506 PLPTrrSPL--PASP 518 Nocardia farcinica IFM 10152
ZP_01204747 500 GLSGcrPAQ--LRNV 512 Mycobacterium vanbaalenii PYR-1
NP_633680   506 GLSEkkIRG--QDKN 518 Methanosarcina mazei Go1
AAO35051    501 KLNYykDEP--NNID 513 Clostridium tetani E88

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