1ZRT,1EZV,1BE3,3BCC


Conserved Protein Domain Family
Rieske_cytochrome_bc1

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cd03470: Rieske_cytochrome_bc1 
Click on image for an interactive view with Cn3D
Iron-sulfur protein (ISP) component of the bc(1) complex family, Rieske domain; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. The bc(1) complex is a multisubunit enzyme found in many different organisms including uni- and multi-cellular eukaryotes, plants (in their mitochondria) and bacteria. The cytochrome bc(1) and b6f complexes are central components of the respiratory and photosynthetic electron transport chains, respectively, which carry out similar core electron and proton transfer steps. The bc(1) and b6f complexes share a common core structure of three catalytic subunits: cyt b, the Rieske ISP, and either a cyt c1 in the bc(1) complex or cyt f in the b6f complex, which are arranged in an integral membrane-bound dimeric complex. While the core of the b6f complex is similar to that of the bc(1) complex, the domain arrangement outside the core and the complement of prosthetic groups are strikingly different.
Statistics
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PSSM-Id: 239552
Aligned: 68 rows
Threshold Bit Score: 124.209
Created: 18-Feb-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
[2Fe-2S]
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:[2Fe-2S] cluster binding site [ion binding site]
Evidence:
  • Structure:1ZRT_E; Rieske domain of the iron-sulfur protein of Rhodobacter Capsulatus Cytochrome Bc1 Complex binds [2Fe-2S] cluster; contacts at 3.5A
  • Structure:1BE3_E; Rieske domain of the iron-sulfur subunit of Bos taurus cytochrome bc1 complex binds [2Fe-2S] cluster; contacts at 3.5A
  • Structure:1EZV_E; Rieske domain of the iron-sulfur subunit of Saccharomyces cerevisiae cytochrome bc1 complex binds [2Fe-2S] cluster; contacts at 3.5A
  • Comment:The Rieske [2Fe-2S] cluster is liganded to two histidine and two cysteine residues present in conserved sequences called Rieske motifs.
  • Citation:PMID 9651245

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                       
1ZRT_E       49 SIFVDVSAVEVGTQLTVKWRGKPVFIRRRDEKDielarsvplgalrdtsaenankpgaeatdenrtlpafdgtntgeWLV 128 Rhodobacter caps...
AAD07047     44 FTTIDVANMQEGQFSTVEWRGKPVYILKRSKKEgfnekrd------------------------------fkigdsvFTT 93  Helicobacter pyl...
AAP77604     44 FTTFDLSALQEGVLQTVEWRGKPVYILKKTAGSqktqgrd------------------------------fevngavYTV 93  Helicobacter hep...
CAE11146     45 FTTVDLSGMAEGEFKTVEWRGKPVYVLKKTAAMkkcedrd------------------------------vvvgnadYSL 94  Wolinella succin...
AAW35641     45 FTTVDLSGMQDGELRTIEWRKKPIFILKKDASMpkdekrd------------------------------vvvdnaaYTV 94  Campylobacter je...
ZP_00820029  49 PVTVNVDKIEPGQQITVEWRGKPVWIIRRTDAMlenieklnsrvkdpeseea------sqqpayiaetghqrslkpeFIV 122 Marinobacter aqu...
AAG07819     49 PVQVNVGKIDPGQQIIAEWRGKPVFIVHRTKEMldalpslegqladpdska---------seqpeyvdpklrsikpeLAV 119 Pseudomonas aeru...
NP_743477    49 PVKVNIAKVEAGQQMVAEWRGQPVFIVRRTEEIlgnlkkitgdlsdpeska---------svqpayvdpevrsikpeILI 119 Pseudomonas puti...
AAZ19268     50 AVTQDIGSIEAGQMIVIKYRGKPIFVVKRTEEMltllesvkpllsdpdsda---------slqpeycknpersispeILV 120 Psychrobacter ar...
AAW60343     54 LLDVDLSSLAPGQDITVRWRDWPVFIQRRTPQMlaalqapdhlatlrdadsk-------ilqqpkdatnwhrsvrpeYGV 126 Gluconobacter ox...
Feature 1           # ##                         #  # #                                  
1ZRT_E      129 MLGVCTHLGCVPmgdks---------gdfgGWFCPCHGSHYDSAGRIRKG-PAPRNLDIPVAAFvdetTIKLG 191 Rhodobacter capsulatus
AAD07047     94 AIQICTHLGCIPtyqd-----------eekGFLCPCHGGRFTADGVNIAGtPPPRPFDIPPFKIeg-tNITFG 154 Helicobacter pylori J99
AAP77604     94 GIQICTHLGCIPsfnq-----------aaqEFACACHGGRFDASGVNEAGtPPPRPMDIPPFKIdg-tKMVLG 154 Helicobacter hepaticus ...
CAE11146     95 GIQICTHLGCIPsydk-----------gemKFKCACHGGEFDACGKNTFG-PPPTPMEIPPFRIdg-eKLVLG 154 Wolinella succinogenes
AAW35641     95 VIGLCTHLGCIPayqp-----------seqLFKCACHGGEFDTSGKNVFG-PPPKPLEIPPFKIdg-tKLVLG 154 Campylobacter jejuni RM...
ZP_00820029 123 LVGICTHLGCVPtyrpevapa-dlgdewlgGLFCPCHGSKFDLSGRVFTGqPAPLNLEVPPYRFdddaTITIG 194 Marinobacter aquaeolei VT8
AAG07819    120 IVGICTHLGCSPtfrpevapa-dlgpdwkgGYFCPCHGSHYDLAGRVYKGqPAPLNLPIPPYTFdaddVITIG 191 Pseudomonas aeruginosa ...
NP_743477   120 LVGLCTHLGCSPtfrpevapa-dlgpkwvgGYFCPCHGSHYDLAGRVYKSqPAPLNLPVPPHSYesdeIIVIG 191 Pseudomonas putida KT2440
AAZ19268    121 VEGVCTHLGCAPnyrpdvgaadlggndwygGFFCPCHGSKYDLAGRVYSGvPAPLNLPVPDYNMdg-tILTIG 192 Psychrobacter arcticus ...
AAW60343    127 LIGVCTHLGCVPsfekpgs-----tpeakgGYFCPCHGSHFDAAGRVARRaPAPCNLPVPPVTFlsdtKLRIG 194 Gluconobacter oxydans 621H

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