Conserved Protein Domain Family
Nitrogenase_NifN_2

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cd03466: Nitrogenase_NifN_2 
Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Statistics
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PSSM-Id: 239549
Aligned: 7 rows
Threshold Bit Score: 695.291
Created: 13-Feb-2006
Updated: 17-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAW39640     11 HEATRNACYLCAPLGASIAFSGIARCLPYLHGGQGCATYIRRYTISHFREPMDIASSSFGEEATVFGGKDNLFCGLKNVI 90   Dehalococcoides...
AAM72765     11 KTATQNACKLCTPLGACLAFRGIESCVPFLHGSQGCATYIRRYLISHYKEPIDIASSNFNEETAVFGGSHNLQLGLKNVT 90   Chlorobium tepi...
CAF30415      5 KFAVINPCKICQPMGAIFALMGVKNSMPLIHGSHGCSTYMRFQLGRHFKEAVNVASSSMSEANAVLGGEENLKHAIRNVS 84   Methanococcus m...
AAS91670      8 VNLTVNPCKMCMPMGVSNALYGIKNCMTILHGSQGCSTYIRRHMATHYNEPVDIASSSLTEEGTVYGGENNLIKGLENLI 87   Clostridium bei...
AAT37646      7 VNLNVNPCKMCMPMGGVMAFKGIEGNMVILHGSQGCSTYIRRHMATHYNEPIDIASSSLTENGTVYGGTKNLKLGLKNMI 86   Clostridium pas...
AAB86040      3 RNITINPGRICQPLGAVMAFLGVRGAMPLIHGSQGCSTYMRFQITRHFREPVNIASSSLNEATVVYGGEKNLLKAIRTVE 82   Methanothermoba...
ZP_00801687   7 VNLNINPCKCCMPMGASTAFKGIESTMVLLHGSQGCSTYIRRHMAGHYNEPIDIASSSLNEKETVHGGAANLKKGLKNIL 86   Alkaliphilus me...
AAW39640     91 SQYQPDLIGIASTCLSETIGENVPALIeefrqs----vdlgetQLVFASTPSYAGSHLTGFHKAVLATAKALavkk---e 163  Dehalococcoides...
AAM72765     91 QQYKPQVIGIATTCLSETIGDDVPMILkdykaim---ndpnlpTMIFASTPSYSGSHIDGFHTAVRSAVKTFavgg---a 164  Chlorobium tepi...
CAF30415     85 KIYGPEIIGVTTSCLSETIGDDVEGIIrlfktq-----nddlpEIVPISTPSYKHTHVEGYDSTVKALVENLatps---k 156  Methanococcus m...
AAS91670     88 KLYNPEVIGIATTCLAETIGEDVVRLSkifyek----hpdskvKLIPIQSPGYGGTQYGGYFTALRAVVENVemyt---d 160  Clostridium bei...
AAT37646     87 EMYNPKTIGIMTTCLAETIGEDIQRILhefreeekgnevyeniKIMTTSTPGYGGTQAEGYFRALRSIVEQIckkpendv 166  Clostridium pas...
AAB86040     83 ENYKPEVIGVISGCLSETIGDDINRIVriyrd------agsesRIIPVSTPGFKGSHVDGYDMAVTSILRSIagdp--sd 154  Methanothermoba...
ZP_00801687  87 RLYNPKMIGISTTCLAETIGEDIQRLIiefkeee---pqykevSFVPVSTPGYGGTNYEGYYFTIREIVKNIakdt---t 160  Alkaliphilus me...
AAW39640    164 ehGGINIMPGMISPADIRYIKRICQDLGISAALLPDYSDTLDGVswpeyhcfpeGGTPVSVLKGMGGAKASIELCrfsdp 243  Dehalococcoides...
AAM72765    165 kkNLLNLFSGMISPADIRYLKEILKEFGMPFMLLPDYSQTLDGGpwgeyhrippGGTPTSAIADSGSAAASIEFGstlea 244  Chlorobium tepi...
CAF30415    157 pnSKLNVITGMVSPGDIAETKRILREMGIESIILTDTSESMDAPfdgevsfvssAGTTVEELKDTANSFATISLCk---h 233  Methanococcus m...
AAS91670    161 knEKVNVIAGPMSSADMREIKEILEDFKIDYILLPDLSENLDGVhskkynrlpsNGTSIEEIKFMGGAKATIELTtfike 240  Clostridium bei...
AAT37646    167 klNKINIICANLNPGDVRNIKEILETFGVEYTILPDVSNTLDSShndqytrlpaGGTKIEDIEKMGSALATIEMGmtvpy 246  Clostridium pas...
AAB86040    155 qiERVNVINGIMSPADTYELKSILRSMGTEFLMITDTSESLDEPfngdpyfitrHGTPISKIEGASNSMATLSLG----- 229  Methanothermoba...
ZP_00801687 161 piDSINLIAGSLTPADVRKVKEMMDLFAIKYTIVPDISKTLDAPftteykklssEGTKLSEIEKMAGASATIEMGmlvad 240  Alkaliphilus me...
AAW39640    244 QLSAASFLEKcHGLPAYRIGlPVGVRAADEFMDLLSGYAGRPlPEGYTRERGRLLDAYVDAHKYVFGRKALVYGDADFVM 323  Dehalococcoides...
AAM72765    245 KKSAAGYLEAeFGVPRHQLPlPIGIKATDRFFALLEELTEKPmPEKYEDERRRLVDAYADGHKYIFGRKAMLYGEEDLVI 324  Chlorobium tepi...
CAF30415    234 ANSAAKFLHEaYGINSVSPYlPIGLQSTDEFMNELCKLTNKEiPEQITRERGKLIDAMIDAHQHNFGRKVAIYGDPDVVV 313  Methanococcus m...
AAS91670    241 EYSVGSYLEEnFGVKNFRINvPRGLRDTDNFLKVLAKISGNPiPEKYKKQRGRYLDAMIDSHKYNAEARIAIFGEPDFVY 320  Clostridium bei...
AAT37646    247 DYSPGTYLKEeFGVPLYKCNiPMGLRSTDEFMSIISKITGKSmPDKIKLQRGRYLDAMIDSHKYNAEARAVIYGEPELVL 326  Clostridium pas...
AAB86040    230 GCKGGRVLEGrYGIKNIGLEiPAGLENTDRFIGKLTELFDASiSQSLMRDRGRLIDAMIDAHQYTYGRNVAIFTDPGYAV 309  Methanothermoba...
ZP_00801687 241 HLSPGKYLEDqFGIPLYRCPlPIGLENTDKFVSILRKISGKEmPQSLMEDRGRMLDGMIDSHKYNAEGRAAIFGEPDTVY 320  Alkaliphilus me...
AAW39640    324 GIGRFLAEIGMVPVLCTADKggnlagqa-------edllagveKAVVLEGADFADIEtLATElkPDIFIGSSKGYKLARL 396  Dehalococcoides...
AAM72765    325 SMAAFLREIGVVPVLCASGGksgqmkqrml----elipdmdeqGIEACEGVDFVDIEhEAERlkPDMLIGNSKGFTMSKK 400  Chlorobium tepi...
CAF30415    314 GFTRFVLELGMIPSIVCTGSesktfvedi-----kavtkdskhKPVILAPGDLYDLHqEIKKskVDLLIGNSYGSRIAGA 388  Methanococcus m...
AAS91670    321 STARLAVENGAVPVLIASGDvckklepslreevnelsnqlfagECKIIDEADFKEIEkLALDlkVNVMIGSSDGRRIEEK 400  Clostridium bei...
AAT37646    327 AITKTCAENGVLVKLIATGSknkelkakl-----ekelarqveKPVILDDTDFETIEsYAKDfnINVMIGNSDGRRMAGR 401  Clostridium pas...
AAB86040    310 AITSMVLEMGMTPSAVFTGSesiyfneki-----sqlqkeygfKCMAMSGADIFDLQsYISEkpIDVLIGNSYCGRAAEE 384  Methanothermoba...
ZP_00801687 321 AASKLCLENGIRPLVIATGTragklkell-----eedlkkvdeNCMVIDDTDLQTIQkYVRElnINVLIGSSEGKFITEK 395  Alkaliphilus me...
AAW39640    397 LGVPLVRLGFPVHDRLGgarlrCVGYAGTQELFDRIVNALL 437  Dehalococcoides ethenogenes 195
AAM72765    401 HELPLIRIGFPIHDRFGgqrlhHLGYRGTQELFDRIVNTVI 441  Chlorobium tepidum TLS
CAF30415    389 ENIPLIRMGFPIYDRVGaqritSLGYTAGIRLVDTITNTIL 429  Methanococcus maripaludis S2
AAS91670    401 HKIPLIRLSFPIHDRIGgqrilSIGYEGSLNLGDQITNVML 441  Clostridium beijerinckii
AAT37646    402 LGVKIVRIGFPVHDRIGaqrliFTGYNGSAFFIDSIANTIL 442  Clostridium pasteurianum
AAB86040    385 NGIPLMRVGFPVYDRLGsqrirIAGYSGGIEFVDSLTNLII 425  Methanothermobacter thermautotrophicus str. Delta H
ZP_00801687 396 DGVPLVRIGFPIHDRVGaqrktYSGYEGSMRFLDEITNTLL 436  Alkaliphilus metalliredigenes QYMF
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