1EO9,3PCG


Conserved Protein Domain Family
3,4-PCD_beta

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cd03464: 3,4-PCD_beta 
Click on image for an interactive view with Cn3D
Protocatechuate 3,4-dioxygenase (3,4-PCD) , beta subunit. 3,4-PCD catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate. 3,4-PCDs are large aggregates of 12 protomers, each composed of an alpha- and beta-subunit and an Fe3+ ion bound in the beta-subunit at the alpha-subunit-beta-subunit interface. 3,4-PCD is a member of the aromatic dioxygenases which are non-heme iron intradiol-cleaving enzymes that break the C1-C2 bond and utilize Fe3+.
Statistics
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PSSM-Id: 239547
Aligned: 16 rows
Threshold Bit Score: 393.989
Created: 23-Jan-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:3PCG; Pseudomonas Protocatechuate 3,4-Dioxygenase with bound iron and inhibitor
  • Citation:PMID 9254599
  • Comment:active site is formed in the interface between alpha and beta subunit

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                        #                                                                  
1EO9_B           12 RNTEDHPPAYAPGYKTSVLRSPKNALISIAETLs----eVTAPHFSAd-KFGPKDNDLILnyakdgLPIGERVIVHGYVR 86  Acinetobacte...
CAD15143         14 RDTALHPPALTPGYKTSVLRSPRNALISTLNTLs----eTTAPVFHAd-DLGSLDNDLILnyakdgLPIGERIIVHGYVR 88  Ralstonia so...
REF_tigr:PP4656  12 RDRNWHPKALTPDYKTSVARSPRQALVSIPQSIs----eTTGPDFSHl-GFGAHDHDLLLnfnnggLPIGERIIVAGRVV 86  Pseudomonas ...
3PCG_M           11 RDRNWHPKALTPDYKTSIARSPRQALVSIPQSIs----eTTGPNFSHl-GFGAHDHDLLLnfnnggLPIGERIIVAGRVV 85  Pseudomonas ...
AAM44409          1 RDFASHPAYVYPGYGSSVKRGPTRPLIPLKEKLr----dQRVPVYGTe-DLGALDHDLTRnavrngEPLGERIIVTGRVL 75  Acinetobacte...
129714           10 RDWPSHPAYVHPDYRSSVKRGPTRPMIPLKERLr----dQYAPVYGAe-DLGPLDHDLTKnavkngEPLGERIVVTGRVL 84  Burkholderia...
4160660          27 APVEHHPRRDYAPYRSSTLRHPKQPPVTIDVSKdpelveLASPAFGEr-DITEIDNDLTRqh--ngEPIGERITVSGRLL 103 Streptomyces...
AAC38243         10 AGHEANAPLLFPEYKTTRLRSPKNDLILVPQRLg----eITGPVFGNa-DIAKGENDMTHan--ggEAQGQRIIVHGRVL 82  Rhodococcus ...
ZP_00397966      10 ETGSVHAPHLYPPYTSSVKRAPHERLIPLPAALe----nLHGPVFGTd-RLRPDDNDTTRnarvngEPLGERILVRGRLL 84  Deinococcus ...
AAK24379          7 REDAGQPPSLHAPYASTVPRSPRQPLVRIPHTLt----eTTGPSNAWprLMGGAMADLTTqh--kaMPQGQRIIVSGRVL 80  Caulobacter ...
Feature 1                                 #                                      # #          # #   
1EO9_B           87 DQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPWRNRINEWRPAHIHFSL 166 Acinetobacte...
CAD15143         89 DEFGRPVPNALVEVWQANAGGRYRHKKDQYIAPIDPNFGGCGRMLTDANGYYAYRTIKPGPYPWRNRINDWRPSHIHYSL 168 Ralstonia so...
REF_tigr:PP4656  87 DQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDRDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFAI 166 Pseudomonas ...
3PCG_M           86 DQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFGI 165 Pseudomonas ...
AAM44409         76 DEGGRPVRNTLVEIWQANAAGRYVHKNDQHDAPLDPNFLGAGRCITDNEGRYRFLTIKPGAYPWGNHPNAWRPNHIHFSL 155 Acinetobacte...
129714           85 DEGGKPVRNTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCMTDAEGRYRFLTIKPGAYPWGNHPNAWRPNHIHFSL 164 Burkholderia...
4160660         104 DRDGRPIRGQLVEIWQANSAGRYAHQREQHDAPLDPNFTGVGRTLTDDEGGYHFTTVQPGPYPWRNHVNAWRPAHIHFSM 183 Streptomyces...
AAC38243         83 DSAGKPIPDTLIEVWQANAGGRYRHKMDSWPAPLDPHFNGVARCLTDKQGHYEFTTIKPGAYPWGNHHNAWRPAHIHFSL 162 Rhodococcus ...
ZP_00397966      85 DSTGRPVRGALIETWQANAAGRYIHQRDRHDAPLDPNFTGTARMLTDEYGEYELITIRPGAYPWGNHPNAWRPAHIHFSV 164 Deinococcus ...
AAK24379         81 DEDGRPVPNTVMEIWQANAAGRYIHKKDQWDAPLDPNFTGAGRVITDDEGRYQFVSIRPGAYPWGNHHNAWRPAHIHLSL 160 Caulobacter ...
Feature 1                                    #                                         
1EO9_B          167 IADGWAQRLISQFYFEGDTLIDSCPILKTIpSEQQRRALIALEDKSNFIEADSRCYRFDITLRGRRA 233 Acinetobacter sp. ADP1
CAD15143        169 CGDGWAQRLITQMYFEGDPLIAQCPIIRTIpNEAQVRGLIALLDTANHVPLDARCYRFDITLRGRRA 235 Ralstonia solanacearum
REF_tigr:PP4656 167 SGPSIATKLITQLYFEGDPLIPMCPIVKSIaNPQAVQQLIAKLDMSNANPMDCLAYRFDIVLRGQRK 233 Pseudomonas putida KT2440
3PCG_M          166 SGPSIATKLITQLYFEGDPLIPMCPIVKSIaNPEAVQQLIAKLDMNNANPMDCLAYRFDIVLRGQRK 232 Pseudomonas putida
AAM44409        156 FGDYFGSRLVTQMYFPGDPLLAFDPIFQGT-PEHARERLIANFSLDTTQEAYALGYDFDIVLRGRNE 221 Acinetobacter lwoffii
129714          165 FGDYFGSRLVTQMYFPGDPLLAYDPIFQGT-PEAARDRLISRFSLDTTEEGHALGYEFDIVLRGRDA 230 Burkholderia cepacia
4160660         184 FGSAFTQRLVTQMYFPSDPLFPYDPIIQSVtDDAARQRLVATYDHSLSVPEFSMGYHWDIVLDGPHA 250 Streptomyces sp. 2065
AAC38243        163 FGQAFTQRLVTQMYFPDDPFFFQDPIYNSV-PEAARERMISTFDYDHTRDNWAVGFKFDIVLRGQDA 228 Rhodococcus opacus
ZP_00397966     165 FGTNFTQRLVSQMYFPGDPLLAHDPIYQGIpDEKGRQRLISRFDLALTQPNWALGFRFDIVLGGSAQ 231 Deinococcus geothermalis ...
AAK24379        161 LGPAFATRLVTQMYFPDDPLIEIDPIANAV-PLPYRQRLVSRFDIEATKPNWALGYLFDVVLRGRDQ 226 Caulobacter crescentus CB15

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