1TJN


Conserved Protein Domain Family
CbiX_SirB_N

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cd03416: CbiX_SirB_N 
Click on image for an interactive view with Cn3D
Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Statistics
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PSSM-Id: 239509
Aligned: 109 rows
Threshold Bit Score: 55.6557
Created: 19-Jan-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative active
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1:putative active site [active site]
Evidence:
  • Comment:Based on similarity to other members of the family.
  • Comment:The active site is located in a cleft between the N- and C-terminal domains, for members containing two domains.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #                                                                      #  
1TJN_A       26 GLVIVGHGSQl-nHYREVMELHRKRIEesg---afdEVKIAFAArkrrPMPDEAIREMnc---dIIYVVPLFISYGLHVT 98  Archaeoglobus fu...
BAE03959      6 ANILVAHGMRkgdQNKALGEFLDRLLSde-----syEYELAFIEse-eKSIEKTIGRLikqgetQFKVVPLLIFSAMHYI 79  Staphylococcus h...
ZP_00591452  49 GILLLNHGSRserWQKNLLDLEHNVADriltiegidGVRTAFMEha-tPSIADALESFdhegyrHIVVIPVFLTIGTHMF 127 Prosthecochloris...
CAG41471      3 GNIIVAHGMRrgrQNQALEAFISELVKdd-----ihHYHIAFLEse-hQDLETVMTTLiqsgvkQLKIVPLLLFSAMHYL 76  Staphylococcus a...
ZP_00513375  46 AILLINHGSRsneWKRQLLELERRVSSrvaaiegidTLATAFMEha-ePSIAASLRNLdrkgytDIIVIPVFLSVGTHVF 124 Chlorobium limic...
AAN51724      5 GILIIGHGSRessYDREFEQFVQGYHKlhp----eyEIKTAYVEls-kSDVKTALRELskt-hnKILIFPLFLFASNHVK 78  Leptospira inter...
AAO05620      3 GNILVAHGMRkgnQNEALEEFIGTLLKde-----qyYYELAFLEse-tQNLEIIMEKMikqgitKFRIVPLLIFSAMHYI 76  Staphylococcus e...
AAD20823      3 QTIIVMHGMRrgkQNQLLMEELEHVGKqv-----ngEFDVAFIEsd-eLSLPQVIRKYlaegehYFTIVPLLLFSGRHYL 76  Staphylococcus c...
ZP_00558058   4 EFLLLGHGSRrqeANQGLIEVAHKVSKil-----geEVTPVFMDhd-kPSLPDGVLEKiqegakKIIIMPLFLFRGMHVT 77  Desulfitobacteri...
ZP_00801025   4 GLFVLAHGSMaqeAGEIVKEIVTMLEGdkse--afdLLGFGSLQfs-qPDFMQGIDQLveqgaeEIIIVPMFLFQGNHVK 80  Alkaliphilus met...
Feature 1                                               
1TJN_A       99 EDLPDLLgfprgrgi--------kegefegKKVVICEPIG 130 Archaeoglobus fulgidus
BAE03959     80 VDVPEILsnikk--------------dhpeISYEISEPLG 105 Staphylococcus haemolyticus JCSC1435
ZP_00591452 128 DDIPTIIgmkdnpasiqhlklegiarykpkAKTHLAPSLD 167 Prosthecochloris aestuarii DSM 271
CAG41471     77 KDIPNIVhemkr--------------rypdIKVEVSEPLG 102 Staphylococcus aureus subsp. aureus MRSA252
ZP_00513375 125 DDIPTIIgqkqnpttieqmkldgiehyiplARTHLSRPLE 164 Chlorobium limicola DSM 245
AAN51724     79 NDISLILsdlkr--------------efinHQFISAMPLG 104 Leptospira interrogans serovar Lai str. 56601
AAO05620     77 SDIPQILkemka--------------rypqIDSKMSAPLG 102 Staphylococcus epidermidis ATCC 12228
AAD20823     77 EDIPTIMkemql-------------mfpgsIHYQIRQPLC 103 Staphylococcus carnosus
ZP_00558058  78 VDIHEEIreike--------------qypdVEILFANELG 103 Desulfitobacterium hafniense DCB-2
ZP_00801025  81 HDIPEELevlqk--------------khekVKFTLGRPIG 106 Alkaliphilus metalliredigenes QYMF

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