Conserved Protein Domain Family
CbiX_SirB_C

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cd03414: CbiX_SirB_C 
Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Statistics
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PSSM-Id: 239507
Aligned: 44 rows
Threshold Bit Score: 89.5854
Created: 18-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative active
Feature 1:putative active site [active site]
Evidence:
  • Comment:Based on similarity to other members of the family.
  • Comment:The active site is located in a cleft between the N- and C-terminal domains.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #                                                                     #  
BAC13612    127 SKILLVGRGSRSPQTKKDIEQIASNLQMKMN-VHVDVCYLAacSPSFEQGLRSSle----eeGYSRVFVLPYLWFTGVLF 201 Oceanobacillus i...
AAZ55923    133 TAVVLAAAGSSDPHANAVVAAAARDLAARGPwREVRTAFASaaRPSLAEAVEELrt-----aGAQRVAVASYLLAEGFFA 207 Thermobifida fus...
BAC69848    128 TGVVLASAGSTDPEAIAVIGDIAREWRRTGW-CAVRPAFASasLPRTEDAVRELra-----lGCERIAVAPYVLAPGFLP 201 Streptomyces ave...
BAC90520    143 TAVVILAHGSRREEANRLVQDIADGVWENLGgPLVTAAFWKi-QPDLRHTLRELvh-----pSIRRVLILPYFLFEGGMT 216 Gloeobacter viol...
BAD59409    124 DAVVVAAAGSSDPRARADVRRAAALLAEQLH-APVRIGYVAtgAPRVPEVVADLrd-----sGADRVFVASYLLAHGLFQ 197 Nocardia farcini...
ZP_01203456 116 DSVILAAAGTSDPAAMRDLHTTATWLSATIG-ARVELAFAAtgEPRIADAVAGLr------rPGKRVVVASYLLSEGLFQ 188 Mycobacterium va...
AAK44492    116 DSVILAAAGASDRRARADLHTTRTLVSELTG-SWVDMGFAGtgGPDVRTAVQRArdraeanrGARRVVVASFLLAEGLFQ 194 Mycobacterium tu...
ZP_00656406 131 DALVLAAAGSSDPLANQSVARLARVWGSRHK-LPVTAAFASasPPTTGEAVRAFrg-----eGRRHIAVASLFLAPGFLP 204 Nocardioides sp....
NP_826850   182 SAVVLAAAGSRDPESAVDTRRIAQLLAERLG-VPVVPAYASaaAPTVPAALRALaa-----rGRHRVAVASYFTAPGRFA 255 Streptomyces ave...
BAD56260    150 RGVAVAAVGSSSPAANARTAAVARALTARTG-WRTESCFATa-EPGLPAAVARLra-----rGADRVVVAPWFLAPGLLT 222 Nocardia farcini...
Feature 1                                                  
BAC13612    202 QSMESEInnmekk--eknfiLCRQLSDHPImVEALKERVLEAI 242 Oceanobacillus iheyensis HTE831
AAZ55923    208 DRVRTHCtaag------aqiVSAPLGDCPElAAVVLHRYDEAL 244 Thermobifida fusca YX
BAC69848    202 DRIARGAaea--------dvLSDVLGPAPEvAHVLLNRYDEAR 236 Streptomyces avermitilis MA-4680
BAC90520    217 DRITWEVdrlanefpkfdlqLDTVLGPDNHlLPLMQDLVEKTL 259 Gloeobacter violaceus PCC 7421
BAD59409    198 QRLHEAGad----------gVAAPIGVHPAvVRLLAERYRSAA 230 Nocardia farcinica IFM 10152
ZP_01203456 189 DRLRDSGad----------vVTDPLGTHPGvARLIANRFQRAG 221 Mycobacterium vanbaalenii PYR-1
AAK44492    195 ERLRASGad----------vVTRPLGTHPGlAQLVANRFRSAV 227 Mycobacterium tuberculosis CDC1551
ZP_00656406 205 DRAAELAleag------aiaVSQPLGAHPElARTVLARYAVGA 241 Nocardioides sp. JS614
NP_826850   256 TACAEAApw----------iAAAPLGAHPAmARLVLHRYDQTL 288 Streptomyces avermitilis MA-4680
BAD56260    223 DRLHAAApd---------aiHADVLGAHRAfAEVVWDRYDAAV 256 Nocardia farcinica IFM 10152

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