1HRK,1LBQ,1LD3,1C9E


Conserved Protein Domain Family
Ferrochelatase_N

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cd03411: Ferrochelatase_N 
Click on image for an interactive view with Cn3D
Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Statistics
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PSSM-Id: 239504
Aligned: 135 rows
Threshold Bit Score: 101.878
Created: 18-Jan-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active siteC-terminal
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1C9E_A; Bacillus subtilis ferrochelatase with bound inhibitor, N-MeMP; contacts at 3.5A
  • Comment:Structure has Cu2+ inserted into the porphyrin moiety.
  • Comment:The active site is located in a cleft between the N- and C-terminal domains. The active site is partially but not completely symmetrical, containing some residues from equivalent positions in both domains. An insert at the N-terminus of ferrochelatase makes additional contributions to the active site.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #           #   ###                                                      
1HRK_A        5 TGILMLNMGGPEtLGDVHDFLLRLFLdrdlmtlpiq--nklapfiakrLTPKIQEQYRRIgg-gSPIKIWTSKQGEGMVK 81  human
1C9E_A        2 MGLLVMAYGTPYkEEDIERYYTHIRRgrkp---------------epeMLQDLKDRYEAIgg-iSPLAQITEQQAHNLEQ 65  Bacillus subtilis
ZP_00530133   7 IAVVLVAHGEAEtSGFLENYRVSRHTlehaarvmpia-kplqtlislsSSLKKKIRPGNSgk-gSPQNGITRKQAEVLQN 84  Chlorobium phaeo...
ZP_00511916  13 IAVILAAHGEAEtSRFAENYRVSRRTlehaaavmgvp-pvlqigislfSALKKKLNPRRKg---SPHNRISREQARELQN 88  Chlorobium limic...
ZP_00661087   5 VAVILAAHGEAEtDSFPENFSMIRHTfahagavmnip-fplqlaasvfGGLKNLVEFRSSgy-rSPQKHITRMQAERLGD 82  Prosthecochloris...
ZP_00588306   7 IAVILAAHGEAEtTRFIENYRVASHTlahaalvmpip-kplqraialtSSLKKKLRATADtq-aSPQNSITRDQAAALQR 84  Pelodictyon phae...
ABB22993     16 VAVILVAHGEAEgAGFFENYSMIRHTldhaaevmalp-gtvrlvasvvGGMKNCVAFRVSgy-rSPQNRITRQQGALLKE 93  Pelodictyon lute...
ABB23615      6 YAVVVVTYGEVEkLTLRNLWPSSRRIlkvitsqivkvprflvyliadyRSIKHFINWRLSgy-rSSLQAINRRQTAQLRQ 84  Pelodictyon lute...
BAC88111      1 MAVLLVGYGEVEeYQNFAAYNEMALRlltakflkip--efgfkllagtLARKDRREWAGRdnfrSPHNDVFEAQRAGIAR 78  Gloeobacter viol...
ZP_00532290  22 IAVILAAHGEAEtAGFFDNFSMTRHTlahagevmnlp-vplqlmisvaGGLKNMVKFKKKny-rSPQNRITRKQAALLAE 99  Chlorobium phaeo...
Feature 1                                                              ##                       
1HRK_A       82 LLDelsp---ntapHKYYIGFRYV-HPLTEEAIEEMErdgleRAIAFTQYPQYSCSTTGSSLNAIYRYYnqvgrkptMKW 157 human
1C9E_A       66 HLNeiqd----eitFKAYIGLKHI-EPFIEDAVAEMHkdgitEAVSIVLAPHFSTFSVQSYNKRAKEEAekl---ggLTI 137 Bacillus subtilis
ZP_00530133  85 HLDvlsde--tdlaFRVIAAFSAS-PPFMENIIEETRaf--dGQILVNMSPMDNSLTCGLLCGYIADTYtgp---elTKV 156 Chlorobium phaeo...
ZP_00511916  89 YLGersgn--grivFDVHAAFSAS-DPSLEEVIEKTKhh--dAQILVSMSPVDNDLTCGQLCRYLARTRpad---dlSRV 160 Chlorobium limic...
ZP_00661087  83 ELRrqspg--ddtlYEVSAAYHAA-PPFVEDLLDETSgy--dMQLLVTMSPVDSDLTAGRLQHLADRRSiae--nnaRPP 155 Prosthecochloris...
ZP_00588306  85 QLNhspaa--alfdFEVHAAFSAS-PPYVEHVMEQTRss--dAQVIVSMAPIDSSLSCGLICSCLANSRkae---elGKV 156 Pelodictyon phae...
ABB22993     94 HLRigcdg--lhaeYEVYSAFHAT-PPFISDILRDTRsh--dARLLVSMSPVDSRMTAGTLHLLAEKCRgtv---dgPAP 165 Pelodictyon lute...
ABB23615     85 SLStqapelpedvdIDVLDAYYFV-PPYLEDMLAGLKre-ydGIVVVPMIPVESAFSCGVACRMVEDAYgdt---ryGKV 159 Pelodictyon lute...
BAC88111     79 HLQehf-----gdrVEIFKAFNFCeGYLPQQVLAQIRargfrRLLVYPLLVIDSIFTSGLALQQINEALaeee-rwvDEL 152 Gloeobacter viol...
ZP_00532290 100 KLAgqae----airYDVHASFFVT-PPFVEQIVEQVRdc--dMLLLIPMAPIDNRLMSGSLEILAERYLppr---vpSRP 169 Chlorobium phaeo...
Feature 1                
1HRK_A      158 STIDRWPTH 166 human
1C9E_A      138 TSVESWYDE 146 Bacillus subtilis
ZP_00530133 157 KVISGFWRD 165 Chlorobium phaeobacteroides DSM 266
ZP_00511916 161 KVISRFWCD 169 Chlorobium limicola DSM 245
ZP_00661087 156 VVISGFWDD 164 Prosthecochloris vibrioformis DSM 265
ZP_00588306 157 KVLSRFWND 165 Pelodictyon phaeoclathratiforme BU-1
ABB22993    166 VVVDGFWGD 174 Pelodictyon luteolum DSM 273
ABB23615    160 RLMNRFWSD 168 Pelodictyon luteolum DSM 273
BAC88111    153 RYLPSFYNE 161 Gloeobacter violaceus PCC 7421
ZP_00532290 170 QVISGFWND 178 Chlorobium phaeobacteroides BS1

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