Conserved Protein Domain Family
D-galactonate_dehydratase

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cd03325: D-galactonate_dehydratase 
D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactonate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway. D-galactonate dehydratase belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Statistics
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PSSM-Id: 239441
Aligned: 13 rows
Threshold Bit Score: 517.264
Created: 15-Dec-2005
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putative metalputative active
Feature 1:putative metal binding site [ion binding site]
Evidence:
  • Comment:based on the homology to other subfamilies

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                       
YP_026237     2 KITKITTYRlp---------pRWMFLKIETDe-GVVGWGEPviegrartveAAVHE-LGDYLIGQDPsrINDLWQVMYRa 70  Escherichia coli...
ZP_00520492  56 RITNLKTFGvtipg--apadrPYVFVKLETNa-GLVGWGEGtlegkagsvmACIND-FHDFLIGADPmpVEHHWQSMYVh 131 Solibacter usita...
NP_107473     2 KITAIKALVcna------emrNWVFVRVETDepGLFGWGEAtlewktravvGALQD-LEALLIGQDPrnVEQCYQILTRh 74  Mesorhizobium lo...
CAB61799      2 RIVKVRTFHvr---------pRWLFVAVETDk-GVIGWGEAvvegqarvveRMIGD-LAEYLAGRDPrrIEHHWQGMYRg 70  Streptomyces coe...
ZP_00281363   2 KITRLETFIvp---------pRWCFLKIETDe-GIVGWGEPvvegrahtvaAAVEE-LSDYLIGKDPllIEDHWQVMYRa 70  Burkholderia fun...
AAV47786     10 RTVDYELFEvp---------pRWLFLRLETAd-GTVGWGEPvvegrahtvrAAVEElLDSYLIGENPenIQDHWQAMYRg 79  Haloarcula maris...
EAL19092     58 KIKKIETFYvr---------pRWLFVRIETEg-GVVGWGEGtleghteavqGSMKD-IARRLIGWDAmnIEEIYTYLYRh 126 Cryptococcus neo...
BAE57480      3 KIKSIEYFRvk---------pRWLFVKVTDEq-GRFGWGEGtleghtqaveGALDE-LIARLVGYEAddIEHIWQTAWRl 71  Aspergillus oryzae
YP_147808     2 KITKFETFLvp---------pRWLFLKISTDe-GISGWGEPivegragtvrAAVEE-LSDYLIGKDPlaIEEHWTVLYRg 70  Geobacillus kaus...
CAC48892      2 KITKLTTYIvp---------pRWLFLKIETDe-GVVGWGEPvvegraltveAAVHE-LSDYLVGKDPflIEDHWNVLYRg 70  Sinorhizobium me...
AAV44753     30 QITDFELFAvp---------pRWLLLKLETDe-GIVGWGEPivqgrletvrAAVTElIEAYLLGADPlrTEYHWRKLYQs 99  Haloarcula maris...
ZP_00521023  39 KIMGLKTFVvna------gslNWVFCKVYTNa-GLIGLGEGsvtskeatiaAAIQE-HERFLVGKDPtdIELLWQGMYRf 110 Solibacter usita...
ZP_00520214  53 RITNMRVFGvtlderiaqadrPYVFVKIETNq-GVVGWGEAtlegkasaamACVMD-LKDYIIGSDPmqVEHLWQLMYVg 130 Solibacter usita...
Feature 1                                                                                       
YP_026237    71 gfyrggpilmsAIAGIDQALWDIKGKVLNAPVWQLMGGLv-rDKIKAYSWVggdr---------padVIDGIKTLreiGF 140 Escherichia coli...
ZP_00520492 132 sfyragpvigsAISAIDQALWDLRGKILGVPVYKLLGGPndpEGVRGYYVAnars---------lddLKRLRETAqsqGI 202 Solibacter usita...
NP_107473    75 gfwrlgvegmsAVSGIEIALWDILGKSLGVPVWRLLGGQv-rDYLRTYTHLglgdmkavyesgsadtIVERGRIVtqaGY 153 Mesorhizobium lo...
CAB61799     71 afyrggavlcsAISGIDQALWDITARDLGVPVHALLGGAv-rDSVRMYGHArgvt---------daeFAHAARRSrsaGM 140 Streptomyces coe...
ZP_00281363  71 gfyrggpitmsAIAGVDQALWDIKGKHHGVPVHALLGGQv-rDRIKVYSWIggdr---------psdVANNARAVverGF 140 Burkholderia fun...
AAV47786     80 gfyrggpvlmsAIAGIDQALWDIKGKQLGAPVHQLLGGQa-rDRIRVYQWIggde---------psdVASAAQEQvdaGF 149 Haloarcula maris...
EAL19092    127 rfyrggevlmsAMSGVDIALWDIKGKVLGVPVWELLGGKv-rERCDVYGWVggdr---------psdVAEQAKARkeqGF 196 Cryptococcus neo...
BAE57480     72 gfyrggpvfmsALSGIDIALWDLKGRVLGVPVYQLLGGKv-rQKVQVYAWIggdr---------psdVEVAAKARiaqGL 141 Aspergillus oryzae
YP_147808    71 gfyrggpilmsAISGIDQALWDIKGKYFNAPVHQLLGGPv-rDSIRVYSWIggdr---------psdVAEAAKKAketGF 140 Geobacillus kaus...
CAC48892     71 gfyrggaihmsALAGIDQALWDIKGKALGQPVHSLLGGQc-rDRIKVYSWIggdr---------psdVANNAREVvarGF 140 Sinorhizobium me...
AAV44753    100 gyfrggpilmsALAGIDHALWDIKGRHYGAPVHELLGGHv-rDKLLVYQWLggdd---------pedVAVAAREDrerGY 169 Haloarcula maris...
ZP_00521023 111 prwrggpilnsAISAVEIALWDILGQALGVPIYKLLGGAa-rSRVRMYVDVgs-------------tPEEFLRARe-lGY 175 Solibacter usita...
ZP_00520214 131 sfyrggpvlgsAISGIDQALWDIRGKVMNLPVYEMLGGPvdpRGVRGYYHAsaws---------lseARELRDQTrqaGV 201 Solibacter usita...
Feature 1                                                  #                          #         
YP_026237   141 DTFKLNGceelglid-nsravdaaVNTVAQIREAFGNQIEFGLDFHGrvs-apMAKVLIKELEPYrPLFIEEPVlaeqaE 218 Escherichia coli...
ZP_00520492 203 TAFKGGLpdyyewie-tsakiteaIRHVEMLREGLGPDIDIAVDFHAkts-ptVASVIIKELDPLeLLWVEEPCppenaW 280 Solibacter usita...
NP_107473   154 DAVKVVCipythyvs-pakavdsvADMVGALREAVGPDIDIMVDFHGrpasvnAAMDYLKAIEPArIMFAEEPVppedvA 232 Mesorhizobium lo...
CAB61799    141 TAIKFGLdgpvrald-tveyvdrqVARVAAVREAVGPAFDIALDFHGrts-paMARRLAERLSPMgPLFIEEPClpenvD 218 Streptomyces coe...
ZP_00281363 141 KAVKMNGseelqiid-tfdkvqgvINNVAAVREAVGPNIGIGVDFHGrvh-kpMAKVLAKELDPYkLLFIEEPVlsenaE 218 Burkholderia fun...
AAV47786    150 TALKMNAtpeiervd-npatveaaATRLREVREAVGPEVDIGVDFHGrvt-kpMGKRLASALEPYePMFIEEPVlpehnD 227 Haloarcula maris...
EAL19092    197 RFVKMNAtesigwl----dsphalDDTVKRLAEVKAVGIDAGLDFHGrvh-kgMAKQLAAGLEPHrPFFIEEPLlpghvN 271 Cryptococcus neo...
BAE57480    142 KCVKMNAtedvnwl----dspsavDSCVERLKQVKALGLDAGLDFHGrlh-kpMAKQLAKALEPYrPLFIEEPLlcehpE 216 Aspergillus oryzae
YP_147808   141 TAVKMNAteelqyid-sfkkieeaVERVAAVRQVTGDEFGIGIDFHGrvh-kpMVKILAKELEPYhPMFIEEPVlpehnE 218 Geobacillus kaus...
CAC48892    141 KAIKLNGceemqivd-tnekidkaVETIGLIRDAIGPHVGIGVDFHGrvh-rpMAKVLAKELEPFkLMFIEEPVlsenrE 218 Sinorhizobium me...
AAV44753    170 RAFKFNFarefrpie-tpnavdhaVERVAAIRDAVGDDALVGVDFHGrvs-kpMAADLVERLEQFdLTFIDQPLlpehdD 247 Haloarcula maris...
ZP_00521023 176 TAAKATPlspdqnlvsptkmirdgVSKLQAIRKAVGDDFDIAVDAHGrct-ttMAIDFCTRVEDLdLLFVEEPTqledlG 254 Solibacter usita...
ZP_00520214 202 TALKFQLpdllewve-tgakikraVRHMEMLREGLGPDLDFAVDFHArps-ptVAAIILREIEPLhLLFAEEICppenvR 279 Solibacter usita...
Feature 1                       #                                                               
YP_026237   219 YYPKLAaqthIPLAAGERMFsRFDFKRVLeagGISILQPDLSHAgGITECYKIAGMAEAyDVTLAPHcplGPIALAACLH 298 Escherichia coli...
ZP_00520492 281 AMGRIAkrvrTPIATGERLVaAHGVREIVeqaVVDIIQTDANHVgGITALWKVAAMADLsSISMAPHaceGPIGMLASLH 360 Solibacter usita...
NP_107473   233 GLAHITarsaIPIASGERLIgRREFTQSVaarAFNIAQPDICHTgGLLETKKIAALAETaGIGLAPHnplGPIAGVAALH 312 Mesorhizobium lo...
CAB61799    219 ALAEIAratnVPIAAGERIFtKWGFRELLerrAVSVVQPDLCHAgGISEVRRIAAMAEAhYVALAPHnplGPVSLAACLQ 298 Streptomyces coe...
ZP_00281363 219 ALRDIVnqtsTPIALGERLYsRWDFKHILsggYVDIIQPDASHAgGITECRKIASMAEAyDVALALHcplGPIALATCLQ 298 Burkholderia fun...
AAV47786    228 ALPALAahteIPIATGERMYsRWDYKEVFedgAVDVIQPDLSHAgGITEVYKIASMAEAyDVAMAPHcplGPVALASCVQ 307 Haloarcula maris...
EAL19092    272 ELKDLYnktnIPIALGERLFtRLDVRPYLesgCIDLIQPDIAHAgGISETKKIAIMAEAyDVGLAPHcplGPLAFAASLH 351 Cryptococcus neo...
BAE57480    217 ALKQLSdlttIPIAFGERLYtRWDAKRFLedaSVDVLQPDIAHAgGISETKRIATMAETyDVAIAPHcplGPIALAASIQ 296 Aspergillus oryzae
YP_147808   219 ALKEIArhsnIPIATGERMFsRWDFKTVLsdgYVDIIQPDLSHAgGITEVRKIAAMAEAyDVALAPHcplGPIALAASLQ 298 Geobacillus kaus...
CAC48892    219 ALREIAnhcsTPIALGERLYsRWDFKSVLsdgFVDIIQPDLSHAgGITECRKIAAMAEAyDVALAPHcplGPIALAACLQ 298 Sinorhizobium me...
AAV44753    248 SFASIAerttVPIATGERFYsRYDFKRLLvddGVSILQPDVTHVgGISEMRKVASMAEAfDVAVVPHcplGPVAFAASLQ 327 Haloarcula maris...
ZP_00521023 255 ELALLRektkTHLATGERSFtKYGFADFCsrhLVDYIQPDVCHAgGILELKKIGVLAETyRVNLAPHnpqSLVSTMASLH 334 Solibacter usita...
ZP_00520214 280 AMARAVkystTPIATGERLIaSYGYAELIdlgVVDILQPDIAHVgGVTALWKVSAAAEAsGIRMAPHaceGPIGGIASLH 359 Solibacter usita...
Feature 1                                                                 
YP_026237   299 IDfvSYNAVLQEQsmgihynkgaell---dfvknkedfsmvGGFFKPLtkPGLGVEID 353 Escherichia coli K12
ZP_00520492 361 VDasIPNFLIQECcgqavpqtrdkvw---eewfgfpamrmvNGKYPLPdkPGLGFELT 415 Solibacter usitatus Ellin6076
NP_107473   313 FGisTPNVIIQEEmsgavawydd---------vvtwpidrkPGRWDVPdlPGLGVTVN 361 Mesorhizobium loti MAFF303099
CAB61799    299 VAasTPNFLIQEYlalddgadlga-------gilavpfsveNGHIAVPtgPGLGIEVD 349 Streptomyces coelicolor A3(2)
ZP_00281363 299 IDavSYNAFIQEQslgihynqgndll---dyirnpevfryeDGFVSIPqgPGLGIEVN 353 Burkholderia fungorum LB400
AAV47786    308 VDacSPNALIQEQsidihynettdvl---dyladpsvfdyeDGFVTVPtdPGLGIEID 362 Haloarcula marismortui ATCC 43049
EAL19092    352 VGfsTPNFVICEMslkmhynvgkdll---symlnpevfdieNGSIGLLtaPGLGIELN 406 Cryptococcus neoformans var. neoforman...
BAE57480    297 VAlsTPNFVIQEMslgmhynveagdidlnsylvdksvfdinEGYVKAPsgVGLGIEID 354 Aspergillus oryzae
YP_147808   299 VDavSYNAFIQEQslgihynqgndll---dylvdpsvfeyrNGYVKIPqgPGLGIQIN 353 Geobacillus kaustophilus HTA426
CAC48892    299 VDavSYNAFIQEQslgihyneandil---dyisnkevfayeDGFVSIPqgPGLGIEVD 353 Sinorhizobium meliloti 1021
AAV44753    328 VGfcAQNVVLHEQdldlhdpatsqrl---kvledpetfqfeDGYVKRPtgPGLGIEID 382 Haloarcula marismortui ATCC 43049
ZP_00521023 335 VDatTPSAAIQEStlnrtawlqd--------lfegtgpevkQGYAELPtrPGLGVTLN 384 Solibacter usitatus Ellin6076
ZP_00520214 360 VDaaGPNFLAQEIcgfvdagekgrvw---edlmgfpamrmvNGRYPLPtrPGLGIDIS 414 Solibacter usitatus Ellin6076

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